Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00508 ATGGCAATTGCCAAAGATGAAGAGCTTCGGAGCTCTGGAAAGAGACTGAAATGTGCAAAAGCTGGACGGGATTATCAAGCTACAGGTGAAGAAGACAGCGAACTTCCACTGCAACCGGGTTTGTCCTATCCCACGACACCCACATCTTTCGTTGTATCAGATGCTCTTGATCCCGATTTCCCAATCATTTATGTCAACAAAGTCTTCGAGGTTTTTACTGGGTACCGAGCTGACGAGGTCCTTGGTCGAAACTGCCGTTTCCTTCAATATAGAGATCCTCGTGCTCAAAGGAGACACCCTTTGGTAGACCCTGTTGTTGCTTCGGAGATTAGAAAATGTCTTGAAGATGGTTTTGAGTTCCAAGGTGAACTTCTGAATTTCAAGAAGGATGGTACTCCTTTAGTGAACAGACTTAGTCTTGCACCGATACGGGATGATGATGGAGTTGTCACACATGTAATAGGCATTCAGGTTTTCTCAGAAACAAGTATAGATCTGAACAATTTAACATATCCAGTTTTTAAGGAAACATTCGATAAGGATGTGGACACGACAGGTAAAAATTATTCTCTGAGTGGGCAGTCTATATACACTCAGAATCTAGAAGTATGTGGTATTCTTCAACTTTCTGATGAGGTCTTGGCTCACAACATTTTATCACATCTGACACCAAGAGATGTTGCATCCATTGGATCTGTTTGCAGAAGGATCCGCCTGTTGACAAAGAATGAACATGTGAGAAAGATGGTCTGTCAAAATGCTTGGGGTAGGGAAGTCACTGGCGCACTGGAGCTGATGAGCAAAAATTTGGAATGGGGTCGTCTGACTAGAGAGCTGACAACTCTGGAGGCTGTATGCTGGAAGAAATTTAGAGTTGGCGGAGCTGTTGAACCTTCACGTTGCAATTTTAGTGCCTGTGCAGCTGGAAATAAACTTGTACTCTTTGGAGGCGAAGGAGTCGATATGCAACCTATGGATGACACATTTGTCCTCAATCTAGATGACGCAAATCCGGAGTGGCAGAGGGTGAGTGTAAAGAAATCCCCTCCTGGGAGGTGGGGTCACACTCTGTCATGCTTCAATGGTTCGTGGTTGGTTGTTTTTGGAGGATGTGGTCGGCAAGGATTGCTAAACGATGTCTTTGTGCTTGACTTGGATGCCAAGCAACCTATGTGGATGGAGGTTTCAGGTGGAACTCGGCCGCTTCCGAGATCTTGGCACAGCTCTTGCACAATGGATGGCTCCAAGTTGATTGTCTCAGGTGGGTGCACAGATGCTGGGGTACTACTCAGCGACACACATTTACTAGATCTGACTTCAGACAATCCAACATGGAGAGAAATTCCAACGTCATGGGCTCCTCCATCTCGTTTGGGACACTCTCTTTCGGTCTATGGTGGGAAAAAGATCCTAATGTTTGGTGGACTTTCCAAGAGCGGTCACTTACAGCTTCGATCTGGCGAGGCATATACCATTGACCTAGATGATGAAGAGCCAAGTTGGCGACAATTGGAGTGCAGTGCATTCACAGGTGTAGGCTGCCAAAGTGCTGTTGTTCCTCCTCCGAGACTTGACCATGTTGCCGTCACCATGCCTTGTGGTAGGGTTATCATATTTGGAGGTTCCATTGCAGGGCTTCACTCTCCATCAGAGCTCTTTCTTCTGGACCCTTCTGAAGAGAAACCATCGTGGAGAATTCTAAATGTTCCGGGACAACCCCCTAAATTTGCTTGGGGCCATAGTACTTGTGTGTTTGGAAGTACCAGAGTTCTTGTACTGGGTGGACAAACTGGGGAAGAATGGATACTCAATGAATTGCATGAGTTGTGCTTGGCTAGCAGGCAAGATTCAGATCTGTAA 1860 0.4602 MAIAKDEELRSSGKRLKCAKAGRDYQATGEEDSELPLQPGLSYPTTPTSFVVSDALDPDFPIIYVNKVFEVFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVASEIRKCLEDGFEFQGELLNFKKDGTPLVNRLSLAPIRDDDGVVTHVIGIQVFSETSIDLNNLTYPVFKETFDKDVDTTGKNYSLSGQSIYTQNLEVCGILQLSDEVLAHNILSHLTPRDVASIGSVCRRIRLLTKNEHVRKMVCQNAWGREVTGALELMSKNLEWGRLTRELTTLEAVCWKKFRVGGAVEPSRCNFSACAAGNKLVLFGGEGVDMQPMDDTFVLNLDDANPEWQRVSVKKSPPGRWGHTLSCFNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPMWMEVSGGTRPLPRSWHSSCTMDGSKLIVSGGCTDAGVLLSDTHLLDLTSDNPTWREIPTSWAPPSRLGHSLSVYGGKKILMFGGLSKSGHLQLRSGEAYTIDLDDEEPSWRQLECSAFTGVGCQSAVVPPPRLDHVAVTMPCGRVIIFGGSIAGLHSPSELFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVFGSTRVLVLGGQTGEEWILNELHELCLASRQDSDL* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00508 619 NCBIfam PAS domain S-box protein 56 156 IPR000014 -
Pte14g00508 619 FunFam Adagio protein 1 39 168 - -
Pte14g00508 619 Pfam Galactose oxidase, central domain 300 350 - -
Pte14g00508 619 SMART pac_2 121 162 IPR001610 -
Pte14g00508 619 FunFam Putative LOV domain-containing protein 277 482 - -
Pte14g00508 619 Gene3D - 482 614 IPR015915 GO:0005515
Pte14g00508 619 Gene3D - 276 481 IPR015915 GO:0005515
Pte14g00508 619 SUPERFAMILY Galactose oxidase, central domain 299 604 IPR011043 -
Pte14g00508 619 ProSiteProfiles PAS repeat profile. 55 117 IPR000014 -
Pte14g00508 619 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 40 613 - -
Pte14g00508 619 MobiDBLite consensus disorder prediction 19 40 - -
Pte14g00508 619 Pfam PAS domain 49 157 IPR000014 -
Pte14g00508 619 Pfam Galactose oxidase, central domain 365 410 - -
Pte14g00508 619 Pfam Galactose oxidase, central domain 414 465 - -
Pte14g00508 619 SUPERFAMILY F-box domain 198 258 IPR036047 GO:0005515
Pte14g00508 619 Pfam F-box domain 206 243 IPR001810 GO:0005515
Pte14g00508 619 SUPERFAMILY PYP-like sensor domain (PAS domain) 56 157 IPR035965 -
Pte14g00508 619 Pfam Kelch motif 524 571 IPR011498 GO:0005515
Pte14g00508 619 Gene3D PAS domain 43 168 - -
Pte14g00508 619 FunFam Putative LOV domain-containing protein 483 615 - -
Pte14g00508 619 CDD PAS 55 156 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00508 Pte-Chr14 24663956 24667349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00508 45 158 AGC Kinase Gene Family AT5G58140 44.737 1.19e-22 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00508 14 24663956 24667349 Pte14g00508 14 24663956 24667349 RCT