Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00893 ATGGATATCCATCTCATCCTTTTCACTGCTTTCTTCTTCATGGTCACATATCTCACAACCCCATCTGTTTCTTCCTCTGACTACAACTTCATCTTCGCCGGTTGCTCTCAGATTAGGTACACACCTGGTTCCCCGTACGAAACCAACGTAAACTCCATCCTATCATCATTTGTCAACTCAGCCATGATGACCAATTACAACAAGTTCACTGCTGCTGCCGGCTCCACTCCACAAGACACCGTCTACGGCCTCTACCAATGTGCCGGCAACTTCCGAATCGACCAGTGCGCCGCCTGTATTGCACGTGCCGTCACTCAGCTTGGCACCATGTGCCCGGATGCATGCGGCGGCGTGTTGCAATTGGACGGTTGTTTGATCAAGTATGATAATATAACTTTCTTAGGTGTGGAGGACAAAACAATAGTGGTAAAAAAATGTGGACCGTCGATTGGTTATAATTCTGATGCATTGACTCGCAAAGATGCTGTGTTGGCATATCTGGGTTCGTCGGATTCTGCTAATAAGATGTATGGAGTTAGTACCTCTGAGGACGTATCAGGTGCGGTACAGTGCACAGGCGACTTGAGTGCGAGTGAGTGTCAAGATTGCTTGAGTAATGCGATCGAACGGTTGAAAATGGATTGTGGTGATTCATCATATGGAGATGTGTTCTTGGCTAAATGCTACGCGCGGTACTCAATAGGTGGAGCTCACTCAGGAGCACAACATGGAAAGGATGATAATCACAATGACAATGAGACTGAGAAGACCCTTGCAATTCTAATTGGACTCATTGTTGGGGTTGCTTTAATCATCGTGTTCCTTTCTTTCTTAAGCAAAGGGTGTGACAAAAGAAAAGGTGGTAAATAA 870 0.4586 MDIHLILFTAFFFMVTYLTTPSVSSSDYNFIFAGCSQIRYTPGSPYETNVNSILSSFVNSAMMTNYNKFTAAAGSTPQDTVYGLYQCAGNFRIDQCAACIARAVTQLGTMCPDACGGVLQLDGCLIKYDNITFLGVEDKTIVVKKCGPSIGYNSDALTRKDAVLAYLGSSDSANKMYGVSTSEDVSGAVQCTGDLSASECQDCLSNAIERLKMDCGDSSYGDVFLAKCYARYSIGGAHSGAQHGKDDNHNDNETEKTLAILIGLIVGVALIIVFLSFLSKGCDKRKGGK* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00893 289 ProSiteProfiles Gnk2-homologous domain profile. 138 237 IPR002902 -
Pte12g00893 289 FunFam cysteine-rich repeat secretory protein 3 27 133 - -
Pte12g00893 289 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 6 281 - -
Pte12g00893 289 Pfam Salt stress response/antifungal 174 233 IPR002902 -
Pte12g00893 289 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Pte12g00893 289 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Pte12g00893 289 Gene3D - 27 133 IPR038408 -
Pte12g00893 289 Gene3D - 152 235 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00893 Pte-Chr12 11988834 11991262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00893 7 234 Receptor kinase-like Gene Family AT4G05200 27.083 2.88e-19 85.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00893 12 11988834 11991262 Pte12g00893 12 11988834 11991262 RCT