Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00890 ATGATTTCTGATACCTCTTTCCAAATGGGTTCTGAAAGCTCCAGTGTTGTGGTACCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAATTGGTGATGGAACTGTAAGCTATGGAATGGATGATGCTGATGATATATATATGCAGTCTTGGACAGGGACCATAATTGGGCCTCCTGCTACTGTTCATGATGGTCGCATCTACCAGTTAAAATTGTTTTGCGGCAAGGACTATCCTGATAATCCTCCAACTGTCAGATTTCAAACTCGAGTCAATATGACTTGCATCAATCAAGAAACTGGGGTGGTTGAACCTAGTTTGTTTCCTATGCTTGCTAATTGGCAACGTGAATATACCATGGAGGATATATTGATGCAGTTGAAGAAAGAAATGACATCTCCACAAAACCGGAAGCTGGTTCAACCTCCTGAAGGCAATGAAGATGGCAGGTCAGATCAAAAGGGACTGGTGCTTAGATGTTGTATTGTCTAA 504 0.4187 MISDTSFQMGSESSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPATVHDGRIYQLKLFCGKDYPDNPPTVRFQTRVNMTCINQETGVVEPSLFPMLANWQREYTMEDILMQLKKEMTSPQNRKLVQPPEGNEDGRSDQKGLVLRCCIV* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00890 167 SMART ubc_7 22 166 - -
Pte12g00890 167 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 10 152 - -
Pte12g00890 167 Pfam Ubiquitin-conjugating enzyme 49 144 IPR000608 -
Pte12g00890 167 SUPERFAMILY UBC-like 17 150 IPR016135 -
Pte12g00890 167 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 19 167 IPR000608 -
Pte12g00890 167 MobiDBLite consensus disorder prediction 137 156 - -
Pte12g00890 167 Gene3D Ubiquitin Conjugating Enzyme 4 152 IPR016135 -
Pte12g00890 167 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 52 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00890 Pte-Chr12 11934022 11938726 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00890 12 11934022 11938726 Pte12g00890 12 11934022 11938726 RCT