Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00869 ATGGCGATAGAGTGCCTCATACTAGGTGCTGGGCAAGACGTTGGTAAGAGCTGTGTTGTAGTAACCATTGATGGGAAACGAATCATGTTCGACTGTGGAATGCACATGGGTTATCTAGACCACCGTCGATACCCAGATTTTTCTCGTATTTCAAGTTCTGGCGATTTTAACACTGCACTTTCTTGTGTCATCATAACCCACTTTCACTTGGATCACATTGGTGCATTGCCTTACTTCACTGAAGTTTGTGGTTATGATGGACCAATTTACATGACGTACCCAACCAAGGCTTTGGCTCCACTAATGCTGGAGGACTATCGAAAAGTAATGGTTGATAGAAGGGGTGAGGAAGAAGTATTCTCCTCTGAACAAATTTCAAAGTGCATGAAGAAAGTTATTGCAGTAGATCTAAAGCAGACTTTGCAGGTTGATAAGGAACTACAGATCCGTGCTTATTATGCAGGACATGTACTTGGAGCTGCAATGTTTTATGCAAAGGTGGGAGACTCAGAGATTGTGTACACAGGGGACTACAATATGACACCTGATAGACATCTTGGTGCAGCTCAAATTGATCGTTTGAGGCTTGATCTTCTGATAACAGAATCCACTTATGCAACAACGTTCCGTGATTCAAAATACAACCGGGAGATGGAGTTTCTGAAAGCTGTTCACAAGTGCATATCTGGTGGTGGAAAAGTGCTTATTCCAACGTTTGCTTTAGGAAGAGCTCAGGAAATTTGTATTCTGCTGGAAGACTATTGGGAGCGTATGAATTTGAAGGTTCCTATATACTATTCTGCAGGATTGACAAAGCAAGCCAATATGTACTACAAGGTACTTATTGGATGGACCAGCCAGAAGATCAAAGAGACATACACTTCACGGAATGCATTTGACTTCAAGAATGTTCATGACTTTGATAGGTCAATGATAAATGCTCCTGGTCCTTGTGTCCTCTTTGCCACTCCTGGCATGATCAATGGTGGATTTTCGCTTGAGGTTTTTAAGCAATGGGCTCCATCTGAAAGGAATCTTATCACGTTGCCAGGGTATTGTTTGGCTGGTACTGTAGGACATAAGTTGCTCTCCAGTAAGCCCAGCAAAATTGATCTCGACAAGGACACGCAGATTGATGTGCGGTGCCAGATTCATCAATTGGCCTTCAGCCCTCATACAGATGCCAAAGGGATCATGGATCTAGTCAAATTTCTCTCTCCCAAGCATGTTATACTTGTTCATGGTGAAAAGCCTAAGATGACTTCTCTTAAAGAAAGAATTCATAATGAGCTGGGGATTCCATGTCATGATCCTGCAAATAATGAGATTATTAGTATCCCTTCAACTCATTATGTGAAAGCAAGAGCATCAGATACATTCATCAGAAGTTCCTTAAATCCGAACTTCAAGTTTTTGAAAGGCAGTTCAATGGGTATATCAGATTCTAACTCAGAGCACCAGGGCAATGTGCTGCAGGCACAAATGAGTGATGAAAGAGTTGTGGAAGGAATTCTGGTGGTTGACAGGAAAACAAAAACTAAGGTTGTACACCAGGACGAGCTATTGCTCTTGTTGGGAGAAAAGAGACAGAAGGCTCAGTTTGTGCATTGCTTCCCTCTTCAAAATGCAGAAGAAAGCAATTTTATCTGGGAGAATAACGTGCTTCCAGAATCTAGTACATGCTCTTCCCTTCTGCTCTTACATTCAAAACTTTCTGAGCATATATCTGGATGCACCATTCAGAACTTGGGCGAACATCTTCAAGTGGAATCATTTTTTATGTCCTTCTGTTTGAATGATAATTGTCCTTACAGAATAGGTGATAATTCTCTAGGCCAAGCCACAGGAGCATTTATTTGCTGCAAGTGGTCAGCAGAAGACGACAAGCTTGCATGGAGAATCATATCCATCTTGAGGGGCTTGAGTTCAACCGTGCAATAG 1941 0.4194 MAIECLILGAGQDVGKSCVVVTIDGKRIMFDCGMHMGYLDHRRYPDFSRISSSGDFNTALSCVIITHFHLDHIGALPYFTEVCGYDGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEEVFSSEQISKCMKKVIAVDLKQTLQVDKELQIRAYYAGHVLGAAMFYAKVGDSEIVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTFRDSKYNREMEFLKAVHKCISGGGKVLIPTFALGRAQEICILLEDYWERMNLKVPIYYSAGLTKQANMYYKVLIGWTSQKIKETYTSRNAFDFKNVHDFDRSMINAPGPCVLFATPGMINGGFSLEVFKQWAPSERNLITLPGYCLAGTVGHKLLSSKPSKIDLDKDTQIDVRCQIHQLAFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMTSLKERIHNELGIPCHDPANNEIISIPSTHYVKARASDTFIRSSLNPNFKFLKGSSMGISDSNSEHQGNVLQAQMSDERVVEGILVVDRKTKTKVVHQDELLLLLGEKRQKAQFVHCFPLQNAEESNFIWENNVLPESSTCSSLLLLHSKLSEHISGCTIQNLGEHLQVESFFMSFCLNDNCPYRIGDNSLGQATGAFICCKWSAEDDKLAWRIISILRGLSSTVQ* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00869 646 FunFam Cleavage and polyadenylation specificity factor subunit 3-II 212 392 - -
Pte12g00869 646 CDD INTS11-like_MBL-fold 5 203 IPR041897 -
Pte12g00869 646 Pfam Metallo-beta-lactamase superfamily domain 21 191 IPR001279 -
Pte12g00869 646 SMART Beta_Casp_2 244 362 IPR022712 -
Pte12g00869 646 Pfam Beta-Casp domain 244 362 IPR022712 -
Pte12g00869 646 FunFam Integrator complex subunit 11 isoform X3 8 234 - -
Pte12g00869 646 Gene3D - 212 390 - -
Pte12g00869 646 SMART Lactamase_B_5a 15 232 IPR001279 -
Pte12g00869 646 Gene3D - 8 427 IPR036866 -
Pte12g00869 646 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER 4 645 - -
Pte12g00869 646 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 378 436 IPR011108 -
Pte12g00869 646 SUPERFAMILY Metallo-hydrolase/oxidoreductase 3 447 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00869 Pte-Chr12 10955793 10964114 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00869 12 10955793 10964114 Pte12g00869 12 10955793 10964114 RCT