Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00850 ATGGCTACAATGGAGAGCTTGATTGGGCTCGTTAACAGAATCCAAAGAGCTTGTACAGTGTTAGGCGATCATGGTGGCGAAGGTATGTCGCTTTGGGAAGCTCTACCTTCGGTTGCTGTGGTTGGTGGTCAGAGTTCTGGGAAGTCTTCAGTGTTGGAAAGTGTGGTAGGAAGAGATTTTTTGCCTCGTGGATCAGGTATTGTAACAAGAAGGCCTCTAGTTTTGCAACTGCATAAGATTGAAGGCCAAACCGAATATGCAGAATTTCTTCATGCACCACGAAAGAGGTTTACTGATTTTGCTGCTGTGCGAAAGGAAATTAGTGACGAAACGGATCGCCTGACTGGGAAGTCAAAGCAGATCTCTAACATCCCAATTCACCTTAGCATATATTCTCCAAATGTTGTGAATCTGACACTTGTAGATCTTCCTGGTTTGACAAAAGTTGCCATAGAGGGGCAATCAGAAACTATAGTTGAAGATATAGAAAACATGGTTCGTTCATATGTTGAGAAGCCTAACTGCATAATATTGGCTATATCCCCTGCTAATCAAGACATTGCAACTTCAGATGCTATAAAGCTAGCAAGAGAAGTTGATCCATCAGGTGAAAGAACATTTGGTGTTTTAACAAAACTTGACCTCATGGACAAGGGAACCAATGCTCTTGATGTTCTTGAAGGAAGAGCATACAGGCTCCAACACCCTTGGGTTGGCATTGTCAATCGCTCACAAGCTGACATCAACAAGAATGTTGACATGATTGCTGCTAGAAGAAAGGAACAAGAATATTTTGAGACAAGTCCTGAGTATGGACACTTGGCTCATAAGATGGGAGCCGAATATCTAGCTAAACTTTTGTCCAAGCATTTGGAGACTGTTATCAGACAGAGAATACCAAGTATTATTGCTTTTATAAACAAGACTATTGATGAGCTTAATGCAGAGCTAGACCGAATTGGCAGACCTATTGCAGTTGACTCAGGGGCCCAGCTATATACAATATTAGAAATGTGCAGAGCATTTGACAAAGTGTTCAAAGAGCATTTGGATGGAGGGCGGCCTGGTGGAGACCGTATTTATTTAGTTTTTGACAACCAACTACCAGCTGCTCTAAAGAAGCTTCCTTTTGATCGGCATCTTTCGACGAAGAATGTCCAGAAAGTTGTTATGGAAGCTGATGGTTATCAACCCCATTTGATTGCTCCTGAGCAAGGCTACCGAAGACTAATTGATGGATCTATTGGCTACTTCAAAGGCCCTGCTGAGGCATCTGTGGACGCTGTTCACTTTGTATTGAAAGAACTTGTACGGAAATCAATTGCTGAAACAGAGGAACTGAAAAGGTTTCCTACGCTAGCTGCTGATATAGCTGCTGCTGCAACAGAAGCCCTGGAGAGATTTAAGGAAGAAAGCAGGAAGACAGTTATACGGTTGATAGAAATGGAATCTAGTTACCTGACAGTAGAGTTCTTCAGAAAACTTAGTGACCCTGACAAGAACCCAAATCAGAATCCAAATCAAAACCCTAATCAGACACGAAATCAGAATCTAAATGCACAGAACATTGACATGTCACCAGAGAGTTATCTCAGGAGGATTGGAACAAATGTCAGCGCATACATTAATATGGTCTGTGAAACACTCAAGAATTCTATCCCCAAGGCTGTGGTTTACTGTCAAGTTCGTGAGGCTAAAAGATCACTTCTTAACCAGTTCTATGTACAAGTTGGAAAGAAAGAGAAGGAGCAGCTAGGACAGATATTAGATGAAGATCCAATGCTTATGGAAAAGAGGACACAGATTGCTAAAAGGTTGGAATTATATAAGTCAGCAAGGGATGAAATTGACGCTGTTGCTTGGAAGTAA 1869 0.4173 MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKIEGQTEYAEFLHAPRKRFTDFAAVRKEISDETDRLTGKSKQISNIPIHLSIYSPNVVNLTLVDLPGLTKVAIEGQSETIVEDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLDLMDKGTNALDVLEGRAYRLQHPWVGIVNRSQADINKNVDMIAARRKEQEYFETSPEYGHLAHKMGAEYLAKLLSKHLETVIRQRIPSIIAFINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHLDGGRPGGDRIYLVFDNQLPAALKKLPFDRHLSTKNVQKVVMEADGYQPHLIAPEQGYRRLIDGSIGYFKGPAEASVDAVHFVLKELVRKSIAETEELKRFPTLAADIAAAATEALERFKEESRKTVIRLIEMESSYLTVEFFRKLSDPDKNPNQNPNQNPNQTRNQNLNAQNIDMSPESYLRRIGTNVSAYINMVCETLKNSIPKAVVYCQVREAKRSLLNQFYVQVGKKEKEQLGQILDEDPMLMEKRTQIAKRLELYKSARDEIDAVAWK* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00850 622 CDD DLP_1 35 300 IPR001401 GO:0003924|GO:0005525
Pte12g00850 622 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Pte12g00850 622 PRINTS Dynamin signature 201 217 IPR022812 -
Pte12g00850 622 PRINTS Dynamin signature 132 149 IPR022812 -
Pte12g00850 622 PRINTS Dynamin signature 35 53 IPR022812 -
Pte12g00850 622 PRINTS Dynamin signature 224 243 IPR022812 -
Pte12g00850 622 PRINTS Dynamin signature 60 77 IPR022812 -
Pte12g00850 622 PRINTS Dynamin signature 182 200 IPR022812 -
Pte12g00850 622 MobiDBLite consensus disorder prediction 497 519 - -
Pte12g00850 622 ProSiteProfiles GED domain profile. 531 622 IPR020850 -
Pte12g00850 622 SMART dynamin_3 4 251 IPR001401 GO:0003924|GO:0005525
Pte12g00850 622 Pfam Dynamin central region 221 488 IPR000375 -
Pte12g00850 622 Pfam Dynamin family 38 212 IPR045063 -
Pte12g00850 622 FunFam Dynamin-related protein 1C 331 599 - -
Pte12g00850 622 Gene3D Dynamin, middle domain 326 585 - -
Pte12g00850 622 Gene3D - 4 309 IPR027417 -
Pte12g00850 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 308 IPR027417 -
Pte12g00850 622 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 300 IPR030381 GO:0005525
Pte12g00850 622 Pfam Dynamin GTPase effector domain 528 619 IPR003130 GO:0003924|GO:0005525
Pte12g00850 622 FunFam dynamin-related protein 1E 4 309 - -
Pte12g00850 622 MobiDBLite consensus disorder prediction 498 519 - -
Pte12g00850 622 SMART GED_2 526 619 IPR003130 GO:0003924|GO:0005525
Pte12g00850 622 PANTHER DYNAMIN 5 619 IPR022812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00850 Pte-Chr12 10004331 10010568 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00850 12 10004331 10010568 Pte12g00850 12 10004331 10010568 RCT