Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00847 ATGGGTAAGACAATTGAGTTGTGCGGATTCCCTAGTGGGGTTTCAGCTTCAGATGTCAAATCATTCATCGAGCAAATTACAGGTGAAGGAACTGTCTATGCTTTGAAAATCAGACAAGGCAAGGGCAGGCTTCCTAAGACATATGCAATTGTTCAATTCACAACAAACAAAGATGCAGATTTTATGGTTTCATTTCCCAAACAAGCGATATGGTATGGTAATGGTTATCTGAAGGGACGTGAATTGCAATTAGACATTGTGCCAAACCCGAGAACATATCTGCATACATTGGAGGATGTGACCTTGTTCTTGGGATGTCCAAGTTCAAAAGAGAGCTTCTCAGTTTTCTGGAGAAAGACAAATGTTGAAGTTAGGTTTGGAGAAAGACAAATGTTGAGGAAAGTGCAGTTCTTTTTGTCCCATGGTCCTGTCTATTACAGACTTGACCTTTCTTATGAAAACATTTGGCAGATTGAATTGCATCAGCTACAGGGTCAACAGGCCAAGTACCTTGTTATTCAGTTACTTGGTGCACCAAGAGTCTTCGAGCAAGATGGGCGGCCTTCCATGAATTTACTTGCTAATCCTCTTTTTAACTATTACAAAGATGGTAATGATGACCAATGGGTTCGAGCAACTGACTTCACTCCTTCGTGTTCGCTTGGACAATCATCAGCTATATGTTTGAAGCTTCCCCATGGTCACCGACTTCCTGACTTGAGAGAAAATTTTCCCTACTATGTTGAAAGTGAAAAAAATTATGGTTTAGAAATGAGCACCCCTTTCTCCTCCAACCTTGATTTTGTTCCTATGGTGAATTCCCCAGCCGGCATAGACATACCATTTGGGATCTTATTCAAAATCAACTCATTGATTCAGTATGGGTGCATTTCTGGTCCAACACTTGATCGTACCTTCTATCAGCTGGTTGATCCTCGTAGGATTAGCATCAATTTCATTGAACATGCCTTGGAGAAACTGTTTCACCTGAAAGAACTATGCTCTGAGCCTTCAAAGTGGTTAGCTGAGCAGTACTGGAAGTACTGGACATCAAGAAATCCACCTAGACCTCACACTATCTCTTTAGATTCTGGACTGGTTTATGTCCGTAGAGTTCAGATCACACCTTGCAAAGTCTACTTCTGCGGCCCTGAGGTTAATGTATCCAATCGTGTTATTCGCCATTTCCATCAAGACATCGATAATTTTCTTCGTGTTTCATTTGTTGATGAGGAATTGGAAAAGCTGTATTCGACAGATATATCTCCTCGAGGCACATCTCCTACTGTTGAGCACAGGAGAACAGCAATTTACAAGAGGATTCTTGATACTCTTAGAAATGGCATTACCGTTGGCAACAAGAGGTTTGAGTTTCTTGCTTTTTCGTCAAGTCAACTACGCGATAATTCAACATGGATGTTTGCTTCAAGACAAGGACTTAGTGCAGCTGATATAAGAAACTGGGTGGGAAACTTTCGTGATATCAGAAATGTTGCCAAATATGCTGCCAGACTCGGACAGTCTTTTGGTTCATCTACTGAAACTCTTAGTGTTGTTAATCATGAGATCGAAATGATTCCTGACATAGAGATCAACCACAATGGCGGCAAGTATAATTTCTCTGATGGAATTGGCAAGATATCCGGTGAATTTGCGCGAAGGGTAGCTCAGAAATGTGACCTCAAGTTCACTCCATCCGCCTTTCAGATTCGTTACGGAGGATACAAAGGAGTAGTGGCCGTTGATCCTCGTTCTTCAGTCAAATTATCATTGAGGAAGAGCATGCTGAAATTCAAGTCTGAGAACAACAAGTTAGATGTTTTGGCTTACAGCAAATTTCAGCCTTGTTTCCTGAATAGACAAGTGATTACTCTCTTATCTACTCTAGGGGTGAACGACCATATTTTTGAAAAAAAACAGAAGGAAGCCATCAAGCAGTTAGATGCAATATTAACAGATTCATTCAGGGCTCAGGAGGCCTTGGACTTGATGACAAAAGGAGAGAATGCTGATGTCCTGAAAGAAATGCTCAGATGTGGGTATAAACCGGACAAAGAACCTTTTCTGTCAATGATGCTGCAAATCTTGAGGGCGTCGAAGTTGTTGGAATTGAGAATCAAAGCAAGGATTTTCATTCCAAATGGAAGAGCAATGATGGGGTGTCTAGATGAAACACGAACCTTGGAGTATGGTCAAGTGTTTGTTCAAATTTCTTCTGCTAGGTTAAGGCAACCAAATGAGGATTCCTTTGTGCCTGGATCAGAACAACACCGTTTAGTGAAGGGGAAAGTTGTAGTGGCCAAAAACCCCTGCTTGCACCCAGGTGATGTGCGTGTCCTGGAAGCAGTGGATGTTCCAGCTTTGCATCACATGGTGGATTGTATCGTTTTCCCTCAGAAAGGTAAAAGGCCTCATCCAAACGAGTGTTCTGGAAGTGATCTGGATGGAGATATCTACTTTGTCAGCTGGGACCCTGAATTAATCCCATCTAATCCAGCAGCTCCCATGGAGTATACCCCTGCAAAAAGTGCAGAATTGGATCATGATGTCACTATTACTGAAGTTGAAGAGTATTTTGCCAACTACATTGCCAACGATAGCTTAGGAATAATAGCCAATGCCCACACAGTATTTGCAGATAAAGAGACTCGTAGAGCATGGAGTTCACCATGCCTTGAGCTTGCTAAGCTATTTTCCATTGCTGTCGACTTTCCCAAGACTGGTGTTCCAGCTATTATACCATCTAATCTTTATGTGAGAGAAAATCCAGACTTCATGGAGAAGCTTGAGAAGCCCATGTATGAATCAACCAGTGTGATAGGAAAGCTTTACAGACAAGTAAAGGACATTTCCCCACATACATGCTATATCAAATCCTTCACTAGGGAAGTGGCAAGGCAGTCATATGACCGTGATATTGAAGTTAATGGCTTTGAGGATTATCTGGAAGATGCTTTCTATCACAAAAGCAACTACGACTATAAGTTGGGGAATCTGATGGATTATTATGGAATCAAAACAGAAGCTGAAATACTCAGTGGGAATATAATGCGAGCGTCGAAATCTTTCACCAAAAAAAGAGATGGAGAAGCAATTAACATGGCAGTGGCATCCTTAAGAAAAGAAGCTAGATCCTGGTTTGATGAAAAGGGTACTGGATTAGATCTTGATGCTGAGGATGATGTTTACGCAAAAGCTTCAGCTTGGTACCATGTCACCTACCATCCTAGTTATTGGGGATGCTATAATGAAGGTATGAACAGGGATCATTACCTAAGTTTTGCTTGGTGCGTTTATGACAAGCTTGTTGAAATAAAGAAAGCCAAAACAGGAGGTAGAATGACTATGCAATTGTTCCACGATTTCAGGCGAAAAATCCATCTAGTTTAG 3390 0.4139 MGKTIELCGFPSGVSASDVKSFIEQITGEGTVYALKIRQGKGRLPKTYAIVQFTTNKDADFMVSFPKQAIWYGNGYLKGRELQLDIVPNPRTYLHTLEDVTLFLGCPSSKESFSVFWRKTNVEVRFGERQMLRKVQFFLSHGPVYYRLDLSYENIWQIELHQLQGQQAKYLVIQLLGAPRVFEQDGRPSMNLLANPLFNYYKDGNDDQWVRATDFTPSCSLGQSSAICLKLPHGHRLPDLRENFPYYVESEKNYGLEMSTPFSSNLDFVPMVNSPAGIDIPFGILFKINSLIQYGCISGPTLDRTFYQLVDPRRISINFIEHALEKLFHLKELCSEPSKWLAEQYWKYWTSRNPPRPHTISLDSGLVYVRRVQITPCKVYFCGPEVNVSNRVIRHFHQDIDNFLRVSFVDEELEKLYSTDISPRGTSPTVEHRRTAIYKRILDTLRNGITVGNKRFEFLAFSSSQLRDNSTWMFASRQGLSAADIRNWVGNFRDIRNVAKYAARLGQSFGSSTETLSVVNHEIEMIPDIEINHNGGKYNFSDGIGKISGEFARRVAQKCDLKFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMLKFKSENNKLDVLAYSKFQPCFLNRQVITLLSTLGVNDHIFEKKQKEAIKQLDAILTDSFRAQEALDLMTKGENADVLKEMLRCGYKPDKEPFLSMMLQILRASKLLELRIKARIFIPNGRAMMGCLDETRTLEYGQVFVQISSARLRQPNEDSFVPGSEQHRLVKGKVVVAKNPCLHPGDVRVLEAVDVPALHHMVDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPSNPAAPMEYTPAKSAELDHDVTITEVEEYFANYIANDSLGIIANAHTVFADKETRRAWSSPCLELAKLFSIAVDFPKTGVPAIIPSNLYVRENPDFMEKLEKPMYESTSVIGKLYRQVKDISPHTCYIKSFTREVARQSYDRDIEVNGFEDYLEDAFYHKSNYDYKLGNLMDYYGIKTEAEILSGNIMRASKSFTKKRDGEAINMAVASLRKEARSWFDEKGTGLDLDAEDDVYAKASAWYHVTYHPSYWGCYNEGMNRDHYLSFAWCVYDKLVEIKKAKTGGRMTMQLFHDFRRKIHLV* 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00847 1129 PANTHER RNA-DEPENDENT RNA POLYMERASE 3 1109 IPR007855 GO:0003968
Pte12g00847 1129 CDD RRM_SF 5 85 - -
Pte12g00847 1129 Pfam RNA dependent RNA polymerase 374 947 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00847 Pte-Chr12 9908561 9914284 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00847 12 9908561 9914284 Pte12g00847 12 9908561 9914284 RCT