Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00845 ATGGCGGGTAGGGATGATAGAATGGACTTAGAGCCAGAGAAGCGGAGCCTTCTAAACCAGCACAAAGAGCATCACTTCACTGCTGGTGAGATCGTGCGCGACATCATCATTGGTGTCTCCGATGGCCTCACCGTGCCGTTTGCCCTTGCTGCCGGTTTGTCTGGCGCCAATGCTACTTCCTCCATCGTTTTAACCGCCGGCATAGCTGAAGTTGCCGCCGGTGCTATATCAATGGGACTAGGCGGGTACCTTGCTGCAAAAAGTGAAGCTGATCATTATAAGAGGGAACTAAGAAGAGAGCAAGAAGAAATTGTTACAGTGCCAGATACTGAAGCAGCAGAGGTGGCTGAAATATTGGCAGACTATGGTATAGAGCCACATGAATATGGACCTGTTGTTAATTCACTCAGGAAAAACCCTAAGGCGTGGCTTGATTTCATGATGAAATTTGAGCTGGGGTTGGAGAAGCCAGATCCAACGCGAGCATTACAAAGTGCATTCACAATTGCCATAGCATACATTTTGGGGGGATTAGTACCCCTTATTCCTTACATGTGCATTTCAAAAGTAACTGAAGCAGTGACAGCATCTGTTGCTATAACCTTACTGGCACTTCTAATATTCGGCTATGCAAAGGGTTACTTCACTGGCAATAAGCCCATTAGGAGTGCTTTGCAAACAGCTTTCATTGGTGCCATTGCATCTGCTGCTGCTTTTGGCTTGGCCAAGGCTGTTCATCCATGA 744 0.4718 MAGRDDRMDLEPEKRSLLNQHKEHHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYKRELRREQEEIVTVPDTEAAEVAEILADYGIEPHEYGPVVNSLRKNPKAWLDFMMKFELGLEKPDPTRALQSAFTIAIAYILGGLVPLIPYMCISKVTEAVTASVAITLLALLIFGYAKGYFTGNKPIRSALQTAFIGAIASAAAFGLAKAVHP* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00845 247 Coils Coil 83 103 - -
Pte12g00845 247 Pfam VIT family 32 242 IPR008217 GO:0005384|GO:0030026
Pte12g00845 247 CDD CCC1 11 245 - -
Pte12g00845 247 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 19 245 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00845 Pte-Chr12 9853299 9855909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00845 7 245 Nodulin-like Gene Family AT3G43660 24.481 5.88e-11 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00845 12 9853299 9855909 Pte12g00845 12 9853299 9855909 RCT