Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00844 ATGAGCCGACCAATGGAGGAAGATGGCGTCAAGAATGAGGAAGAGGAATTCAATACTGGACCTTTGTCTGTACTGATGATGAGTGTTAAAAATAACACACAGGTACTTATCAACTGTAGAAATAACCGGAAGCTCCTTGGGCGTGTAAGGGCATTTGATAGGCACTGCAACATGGTTCTTGAGAATGTCCGTGAAATGTGGACTGAGGTACCAAAAACTGGTAAAGGGAAGAAGAAAGCTCAACCTGTCAACAAGGATAGATTTATCAGTAAGATGTTTCTCCGTGGAGATTCAGTTATCATTGTTCTCAGGAACCCCAAGTAA 324 0.4228 MSRPMEEDGVKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00844 107 Pfam LSM domain 28 102 IPR001163 -
Pte12g00844 107 Gene3D - 15 107 - -
Pte12g00844 107 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 3 107 IPR027248 GO:0008380|GO:0030532
Pte12g00844 107 ProSiteProfiles Sm domain profile. 22 107 IPR047575 GO:0003723
Pte12g00844 107 FunFam Small nuclear ribonucleoprotein Sm D2 15 107 - -
Pte12g00844 107 SMART Sm3 25 104 IPR001163 -
Pte12g00844 107 SUPERFAMILY Sm-like ribonucleoproteins 20 105 IPR010920 -
Pte12g00844 107 CDD Sm_D2 17 106 IPR027248 GO:0008380|GO:0030532
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00844 Pte-Chr12 9803701 9807048 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00844 12 9803701 9807048 Pte12g00844 12 9803701 9807048 RCT