Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte12g00828 | ATGTCAGTTGAGCAAGTTTCTGACGAACATACGGGGAACCCAGATGAAAAAATGGAATTTTGTGATAAGGGTATTGATCTTCTCAAGGAAACAATGAGGGTAACCGGTGACGGGGTTCAATCAAAATCGTCTAAAGTACGGAATTCAAGTCCTCAGGAGCCTCCTATCCGTTCCGATGATTCGAAGCTACCGGGTTTTCTAGAAAGAGAGGTGTCTGGTAAAAATTTGTTTAATTCTTTTGAAAAAATGAGTTATAAAGGGAAAGGAGTCATTTTTTCTGAGAATACAAATCCAGATGAACAGTGGGTGGAGAGAGATTTTCTCAGTTTGAGTGGTGGTGGAGGAAATTCATCAAAGAGAGCAGTTATAGAAGAAGATCAAGAGGTTGAAAGGCATAAAGATAAGGATAAGAAGCCGAAGTTAGAAACTCTGAATCTCTCTCTCTGTTTGCCTGATGTGTCTCTTTCTCTCACTGCTTCAAATAATCTGCAAAATAATGAATTGCCTGCTAGGCCAAGAGTTGAAACTCAGTCAGTGGATACAAAATGCATGCAGTCTGAGAATTTGAGAGAAATAGAGAGGGTTGATGTTGATAAAGTGAGAAAGATCTGTAGACCAGATAGAATTCTGAAAGAGATTATATCTCAGTCTTTACCTGTCATGTCTCAGTTCATTCAGGAGCTACCTGAAGAAGCAGTGGTATCAGTTAAGGAGTATCTGAAGGATATCATTGAAACACCTGAGAAAAAGGATGAACTGGTGAGCCTACAAAAATGCCTCGAGCGCAGATCTGATCTTACCAAAGAGGCTCTTTCAAAATGCGGTAGAGAGGGATTGGAAATTCTAGTTTCTATCAAGATGGGGCTTGCAAACTATTTGTCTAGAAAAGTTCAAATTTCGAGTGCAGATCTTTTGGAAGTTTTCTTGTTTATGAGATGTAGAAATCCCAACTGCAAGGTCGTATTGCCTTTTGATGATTGTGATTGCAAGATTTGTTCATCAAATAGGGGCTTTTGCAGTTCCTGCATGTGTCCTGTGTGTTTAAACTTTGATTGTGCAAATAACACATGCAGTTGGGTTGGTTGTGATGTTTGTTCCCATTGGTGCCACGCTGCTTGCGGCATTCACAAGAATCTGATCAGGCTTGGACCTAGCTTGAAGGGTCCAGCTGGAACCAGCGAGATGCAGTTTCATTGCATTGGATGTGGACATGCTTCGGAAATGTTTGGTTTTGTTAAGGATGTGTTTTTGTTTTGTGCAAAAGATTGGGCTCAAGAAGCTTTGATGAAAGAACTTGAATGTGTTAGGAGGATCTTCAAGGGAAGTGAAGACTACAAGGGCAAGGAATTGCATAATATAGCTGATGACATTCTTTTTAAGCTTCAAACTAAGATGACATCTGCTTCGAACGCATGCAACCTCGTCATACAGTTTTTCAACTATGCAGGCAGCACATCAAAATTTAGTGCTTCTGCAATGCCATCGAAGGAGTTGGTGCCAACTCAATCCAACCTTGGAAAGGATGTTGTTACACTAGCGCAAGCTAGTTACTTGTCACCTAATAGAGCTCATTATGAAGTCAGCTATCCAAGGTCACAAAGTGATTCACTGGCAAAGGACTTAAGAAGTACCATTTTGAGTGAAGTTAAGTCCAGAGATGAATTCCGGGTGGTAACTTCGCTAGAGAAAAGTGGATTTGATAGCTTGGAAACAATTGTAAAGATCAAGGAGGCTGAGGCAAAAATGTTTGAAGAGAAGGCAGAAGAAGCGAGAAGAGCTGCAGAAGGGTTCAAAAAGATGATCAAAACGAAGATGGACAAGCTGGAAGAAGAGTATGTTCAAAAGCTTGGTAAGTTATGCTTACAGGAGACTGAGGACAAGAGAAGAAAGAAATTGGAAGAGTTAAAGGTGTTGGAAAATTCTCACTGTGATTACTACAAAATGAAAATAAGAATGCAAGCTGAGATTGCCAGTCTTTTGGAGAGAATGGAAGCAACAAAACAAAAGTGGGTGTGA | 2016 | 0.4028 | MSVEQVSDEHTGNPDEKMEFCDKGIDLLKETMRVTGDGVQSKSSKVRNSSPQEPPIRSDDSKLPGFLEREVSGKNLFNSFEKMSYKGKGVIFSENTNPDEQWVERDFLSLSGGGGNSSKRAVIEEDQEVERHKDKDKKPKLETLNLSLCLPDVSLSLTASNNLQNNELPARPRVETQSVDTKCMQSENLREIERVDVDKVRKICRPDRILKEIISQSLPVMSQFIQELPEEAVVSVKEYLKDIIETPEKKDELVSLQKCLERRSDLTKEALSKCGREGLEILVSIKMGLANYLSRKVQISSADLLEVFLFMRCRNPNCKVVLPFDDCDCKICSSNRGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIHKNLIRLGPSLKGPAGTSEMQFHCIGCGHASEMFGFVKDVFLFCAKDWAQEALMKELECVRRIFKGSEDYKGKELHNIADDILFKLQTKMTSASNACNLVIQFFNYAGSTSKFSASAMPSKELVPTQSNLGKDVVTLAQASYLSPNRAHYEVSYPRSQSDSLAKDLRSTILSEVKSRDEFRVVTSLEKSGFDSLETIVKIKEAEAKMFEEKAEEARRAAEGFKKMIKTKMDKLEEEYVQKLGKLCLQETEDKRRKKLEELKVLENSHCDYYKMKIRMQAEIASLLERMEATKQKWV* | 672 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte12g00828 | 671 | CDD | PHD_OBE1_like | 343 | 402 | IPR047578 | - | |
Pte12g00828 | 671 | Coils | Coil | 573 | 600 | - | - | |
Pte12g00828 | 671 | MobiDBLite | consensus disorder prediction | 1 | 65 | - | - | |
Pte12g00828 | 671 | MobiDBLite | consensus disorder prediction | 9 | 30 | - | - | |
Pte12g00828 | 671 | Pfam | Coiled-coil region of Oberon | 535 | 660 | IPR032535 | - | |
Pte12g00828 | 671 | Coils | Coil | 621 | 641 | - | - | |
Pte12g00828 | 671 | Pfam | PHD - plant homeodomain finger protein | 313 | 437 | IPR032881 | - | |
Pte12g00828 | 671 | Coils | Coil | 649 | 669 | - | - | |
Pte12g00828 | 671 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 304 | 325 | IPR004082 | - | |
Pte12g00828 | 671 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 567 | 587 | IPR004082 | - | |
Pte12g00828 | 671 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 224 | 246 | IPR004082 | - | |
Pte12g00828 | 671 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 423 | 442 | IPR004082 | - | |
Pte12g00828 | 671 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 278 | 293 | IPR004082 | - | |
Pte12g00828 | 671 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 350 | 370 | IPR004082 | - | |
Pte12g00828 | 671 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 606 | 628 | IPR004082 | - | |
Pte12g00828 | 671 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 263 | 278 | IPR004082 | - | |
Pte12g00828 | 671 | PANTHER | VERNALIZATION-INSENSITIVE PROTEIN 3 | 188 | 670 | IPR004082 | - | |
Pte12g00828 | 671 | MobiDBLite | consensus disorder prediction | 36 | 56 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte12g00828 | Pte-Chr12 | 9553307 | 9557234 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte12g00828 | 313 | 462 | PHD Gene Family | AT5G57380 | 24.503 | 1.67e-08 | 55.8 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte12g00828 | 12 | 9553307 | 9557234 | Pte12g00828 | 12 | 9553307 | 9557234 | RCT |