Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02427 ATCACAAGATTTACATTTCTCTCTCTCTCCCTGTCTCCAATATGGCTCTGGCTCCTGGTCGCAATGCGCTTATGGTAGTGATAGTGATGGTGGTTAGCTCTATGGTGCCTGCCTGTGGTGCTAACTTCTACCAAGACTTTGATCTAACGTGGGGTGATCACCGTGCTAAGATATTCAATGGGGGTCAGCTTCTATCTCTTTCTCTGGACAAAGTCTCCGGCTCTGGCTTCCAATCCAAGAAAGAGTACCTATTTGGGAGGATTGATATGCAACTGAAGCTCGTGGCTGGCAACTCAGCAGGAACTGTCACTGCTTACTACAATGCTGAGACTATTGGCGTTCCTTTCCCGAAGAACCAACCCATGAGAATCTATTCTAGCTTGTGGAACGCTGATGACTGGGCCACGAGAGGTGGTTTGGTTAAAACTGATTGGTCCAAGGCACCCTTTAAAGCCTACTACCGCAATTTCAAAGGCACAGAGTTCTCTGTGTCTTCCAATTCGTTCTCTGATGCTGCATGGCAGAGCAACGAGCTGGATGCCTATGGAAGAAGAAGACTGAGATGGGTTCAGAAGTACTTCATGATCTACAACTACTGCAACGATCTTAGGCGATTCCCACAAGGCCTTCCTGCTGAGTGTAGGCGCTGA 650 0.48 MALAPGRNALMVVIVMVVSSMVPACGANFYQDFDLTWGDHRAKIFNGGQLLSLSLDKVSGSGFQSKKEYLFGRIDMQLKLVAGNSAGTVTAYYNAETIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFKAYYRNFKGTEFSVSSNSFSDAAWQSNELDAYGRRRLRWVQKYFMIYNYCNDLRRFPQGLPAECRR 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02427 202 Pfam Glycosyl hydrolases family 16 94 133 IPR000757 GO:0004553|GO:0005975
Pste7g02427 202 Pfam Glycosyl hydrolases family 16 30 93 IPR000757 GO:0004553|GO:0005975
Pste7g02427 202 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 26 93 IPR044791 GO:0004553
Pste7g02427 202 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 93 IPR013320 -
Pste7g02427 202 Gene3D - 94 202 - -
Pste7g02427 202 Gene3D - 14 93 - -
Pste7g02427 202 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 158 200 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Pste7g02427 202 SUPERFAMILY Concanavalin A-like lectins/glucanases 92 201 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02427 Pste-Chr7 23117989 23119252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02427 8 93 Glycoside Hydrolase AT3G23730 68.605 1.70e-35 124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02427 7 23117989 23119252 Pste7g02427 7 23117989 23119252 ECH