Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02364 CTAACACTAATGTATTCTTTTACAAATAGCACAGAAGTTGTAGCTAGGTAGGTCCAGACTCCAGTCCAGACCAAACCCAAAGGGATATATACTAACGTACGCCACAGGGACCGTTAGCTGTGCGGCGCCAATATTCGTTGGTGCTCTCTTTCTTTTTCTCTTTCTGTGTCTTTCCTTTGATATTTTTAACTCTCCTAAGTTATTATAACCCAACCTTTTTTTGAACTCACTGCACTTATCCTAGCTTATTCACCCTCTTTGTCTCTCACAAAAATGGATAATGGTTGTTTCTCTTCCCCTCGACGTGATTTTCCTGCTGGCCTGCGAGTTCTAGTCGTCGACGACGATCCAACTTGGCTCAAGATCCTTGAGAAGATGCTCAAGAAGTGCAATTATGAAGTGACTACATGTTGTTTAGCAAGGCATGCTCTAAACTTGCTTCGTGAAAGGAAGGATGGATATGATATAGTGATCAGCGACGTAAACATGCCTGACATGGATGGTTTCAAACTTCTTGAGCATGTTGGGCTTGAGATGGATCTTCCTGTCATTATGATGTCTGTGGATGGGGAAACAAGCAGGGTGATGAAAGGCGTTCAACATGGAGCCTGTGATTATCTCCTTAAGCCTATTAGGATGAAAGAACTTCGGAACATATGGCAACATGTCTTTAGAAAAAGGATACACGAGGCAAAAGAATTTGAAAGTTTTGAGAGTTTTGAGAGCATTCACTTAATGAGAAATGGATCAGAGCTATCAGATGATGGGAACCTGTTTGCTATAGAAGATGTGAGCTCGGCAAAGAAAAGAAAAGATGCAGATGGCAAACACAACGATAAAGAATGTTTGGATCCATCATCCACCAAGAAAGCTAGAGTAGTCTGGTCAGTAGATCTTCATCAGAAGTTTGTTAAAGCTGTGAATCAGATCGGATTTGACAAAGTCGGGCCAAAGAAAATACTAGATCTGATGAATGTTCCATGGCTGACTAGAGAGAACGTTGCTAGCCATTTGCAGAAATACCGGCTTTATCTGAGTAGGATTCAGAAAGAAAACAATCAAAGATCATCCTCAAGTGGAATGAAGCCTTCAGATTTTCCTTCAAAAGATCAGGGAAGCTTCGGTTTTCAGAATTCATTAAACAAGCAACAAAATGATGTTTCAAATGACAGCTACAATTATTCAGATGGATCATTACAAGTGGGGAACGTGGAAACTAAAAGTCATGAAGGTGATCCCCATGGAATTGTTTCACAGTCTACCATAGCAAAAAAAGGAAGGCTTTTGACTGGTAATATTGCTGACACAAATATGAGAGATAGTTTAAGGGTTGGCCTTAACCAACATTTTGCCCCTCTAGAGTCAGAAGGAAACCATCCAGTGTTTAATTGTTCCATGCCAACACAATACTCTTGGACTGAAGTTCCATGCATGCAACTCAAAGAAGAACACAAATCATATGTTCATTTAGAGGATAGCTTCAGTAAGTTGCCCTTACATGGTAAGCAGCATCCCATCCACGTTGATCAATCACAATCGGTTGCTTCAATTAATTCCACTCCCTCTATAACTGAGGAAGAGGTTGCTGCTTGTATAGAAGCAAAACCTTTGTTTACAGATTACAAGAACGATTATGCCAGTTCTATAAGTTCAATAGGGAATGCAGTTGACAGCTTTCCTATTCAACCAGGAAGTCTTATTATGAATGATCAATCGTCAGAACCCATTTCCACTATAAATTCAGGCTTGAAAACACAGGGATATAATAATCTCAGTTTCATTTCTGATCTGGAACTATACCAAAGAAACCTTCTTTTGGGAGGAGAGGCAAATACTGCACCTTTGGATGAAGACTTGCATTTCTATTGGCTACAAGGTGAGCGCTACAATATGAACTTTGGTCTGCAGCATATAGGAATGCCTGAATATTATGATCCGGGACTTGTTTCTGAAGCTGCTACCCACTTATATGATTCAAACGATTACTCAGTTATAGAGCAGGGTCTATTCATAGCA 2016 0.4013 MDNGCFSSPRRDFPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRIHEAKEFESFESFESIHLMRNGSELSDDGNLFAIEDVSSAKKRKDADGKHNDKECLDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRIQKENNQRSSSSGMKPSDFPSKDQGSFGFQNSLNKQQNDVSNDSYNYSDGSLQVGNVETKSHEGDPHGIVSQSTIAKKGRLLTGNIADTNMRDSLRVGLNQHFAPLESEGNHPVFNCSMPTQYSWTEVPCMQLKEEHKSYVHLEDSFSKLPLHGKQHPIHVDQSQSVASINSTPSITEEEVAACIEAKPLFTDYKNDYASSISSIGNAVDSFPIQPGSLIMNDQSSEPISTINSGLKTQGYNNLSFISDLELYQRNLLLGGEANTAPLDEDLHFYWLQGERYNMNFGLQHIGMPEYYDPGLVSEAATHLYDSNDYSVIEQGLFIA 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02364 581 FunFam Two-component response regulator 195 258 - -
Pste7g02364 581 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160
Pste7g02364 581 MobiDBLite consensus disorder prediction 259 325 - -
Pste7g02364 581 SUPERFAMILY CheY-like 16 146 IPR011006 -
Pste7g02364 581 FunFam Two-component response regulator 17 178 - -
Pste7g02364 581 CDD REC_typeB_ARR-like 19 133 - -
Pste7g02364 581 SUPERFAMILY Homeodomain-like 197 256 IPR009057 -
Pste7g02364 581 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
Pste7g02364 581 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 294 IPR045279 GO:0009736
Pste7g02364 581 MobiDBLite consensus disorder prediction 259 314 - -
Pste7g02364 581 SMART REC_2 17 129 IPR001789 GO:0000160
Pste7g02364 581 Pfam Myb-like DNA-binding domain 201 251 IPR001005 -
Pste7g02364 581 NCBIfam myb-like DNA-binding domain, SHAQKYF class 199 252 IPR006447 GO:0003677
Pste7g02364 581 Gene3D - 195 258 - -
Pste7g02364 581 Gene3D - 17 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02364 Pste-Chr7 22348977 22352846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02364 13 265 Response Regulator Gene Family AT2G25180 56.757 1.15e-82 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Pste7g02364 Response_reg 1.6e-24 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02364 7 22348977 22352846 Pste7g02364 7 22348977 22352846 ECH
Pste7g02364 7 22348977 22352846 Pste3g02675 3 19669166 19676864 PCT