Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02003 GTTTCCCTCAGTCCTCGGTCCTTGTCTTGGTTTTCTGCTGCCCTTGCCTGTGCTTTGTTACAGTGAAGTTCAAGAAATAGCAGATACATGATTCCATAGCCATTTTATTTTTTTTAACAGCCATTTTATTCTATGAAACCATCTTCATCTTGCTCCCTCTTCTTCACTTCATTATCTCCCTCTGTGTCACACATTTAACAAGACCCCCACCCCCCCTTGCTCTTTCCATTTCGTTATTTTCTCTCAAACATTTCATTCTTTTAGCTTTCATCTACTTGTTAGGGAGATTTACAAAATAGCCATGCGCTTTCTTCTGCTTCTTTTTGCAGTATATGTTGCTGCAGCTGATGAAGAACCATTTATAGGGGTGAATATTGGAAGAGATCTCTCAGATATGCCTCATCCCACTCAAGTAGTAGCACTACTTAAAGCCCAGCAAATTCGACATGTTAGGTTGTATGATGCTGACCAAGCTATGCTCATTGCCCTTGCCAACACAAGAATACATGTTGCTGTGTCTGTCCCCAATGAAGAGATCCTTGCAATTGGCCAATCAAATACCACAGCAGCAAAATGGGTTTCTCGTAACGTGGTAGCACATTATCCTGCCACTAACATAACATCTATTTGTGTTGGTTCTGAGGTTTTAACTAGCCTCCCCAATGCAGCTAAAGTGCTTGTCAGTGCTATTAAGTTCATTCATTCAGCCCTTGTGGCATCAAATCTCGATCGCCAAATCAAAGTTTCAACACCCCTTTCCTCTACCATGATCCTTGACTCATTTCCACCCTCACAAGCCTTTTTCAACCGCTCGCTGAATCCAGTCTTGGTTCCAATGCTTGATTTCTTGCAAACCACTGGCTCTTATCTCATGCTCAACATATACCCTTACTATGACTACATGCAGTCAAATGGTGTGATTCCATTGGACTATGCGCTCTTCAAACCACTCCCTCCAAACAAAGAAGCCATTGATTCCAACACCCTTCTCCACTACTCCAACGTGTTTGATGCTGTGGTTGATGCAGCATACTTTGCCATGGCTTTTCTGAATTACACTAACATTCCTGTGGTGGTGACAGAAACTGGCTGGCCCTCAAAAGGTGACTCTAATGAGCCAGATGCAACAGTAGAAAATGCCAACACTTACAACAGCTACTTGATCAAGCACGTGCTCAACATAACTGGAACTCCCAAACACCCTGGAGTTGGTGTTAGTACTTACATCTATGAGCTCTACAATGAGGACGCAAAGGCAGGGCCATTGTCAGAGAAGAACTGGGGTTTGTTTGATGCAAATGGAAAACCTGTTTATGTTTTACAGTTGACAGAATCAGGAGGACTTTTGGCAAATGACACCACCAACCAAACTTACTGTGTTGCAAAGGATGGTGCTGATTCAAAGATGCTGCAGGCTGGAATAGATTGGGCATGTGGACCTGGCAAGGTGGATTGCTCTCCTTTGCTGCAGGGACAACCCTGTTATGAACCTGACAATGTGGTGGCACATGCAAATTATGTTTTTGACACTTACTATCATCAGATGGGAAAGTCTCCACATCTTGGAAACAATGGCACCTTCCCCAACGTCACGTTATCATCAATGAATTCCACAAATTCAGATTCTTCTGCCTGTAATCTTCATCATGGTGAATTGGGAATTAGAAGCCTTCTAACGGGGATAGTACTTCTACTATGGGGAATGATTTTGCTATAAGTACGTCAGAATATGCTTTTTCATTTTAAAAATTACTGGTAGATGAGATGACTATGTTATAATGCTAGTTCAGTTGCATGTTCTAAGCCCATGCAATTTTGTACAAGAGAAGTGTTAGTCACC 1840 0.4234 MRFLLLLFAVYVAAADEEPFIGVNIGRDLSDMPHPTQVVALLKAQQIRHVRLYDADQAMLIALANTRIHVAVSVPNEEILAIGQSNTTAAKWVSRNVVAHYPATNITSICVGSEVLTSLPNAAKVLVSAIKFIHSALVASNLDRQIKVSTPLSSTMILDSFPPSQAFFNRSLNPVLVPMLDFLQTTGSYLMLNIYPYYDYMQSNGVIPLDYALFKPLPPNKEAIDSNTLLHYSNVFDAVVDAAYFAMAFLNYTNIPVVVTETGWPSKGDSNEPDATVENANTYNSYLIKHVLNITGTPKHPGVGVSTYIYELYNEDAKAGPLSEKNWGLFDANGKPVYVLQLTESGGLLANDTTNQTYCVAKDGADSKMLQAGIDWACGPGKVDCSPLLQGQPCYEPDNVVAHANYVFDTYYHQMGKSPHLGNNGTFPNVTLSSMNSTNSDSSACNLHHGELGIRSLLTGIVLLLWGMILL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02003 471 Gene3D Glycosidases 20 347 - -
Pste7g02003 471 Gene3D - 351 454 - -
Pste7g02003 471 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 417 IPR044965 GO:0004553|GO:0005975
Pste7g02003 471 FunFam Glucan endo-1,3-beta-glucosidase 3 20 345 - -
Pste7g02003 471 SMART X8_cls 357 447 IPR012946 -
Pste7g02003 471 SUPERFAMILY (Trans)glycosidases 21 340 IPR017853 -
Pste7g02003 471 ProSitePatterns Glycosyl hydrolases family 17 signature. 255 268 IPR000490 GO:0004553|GO:0005975
Pste7g02003 471 Pfam Glycosyl hydrolases family 17 21 341 IPR000490 GO:0004553|GO:0005975
Pste7g02003 471 Pfam X8 domain 358 418 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02003 Pste-Chr7 18368801 18372315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02003 15 463 Glycoside Hydrolase AT1G66250 69.118 0.0 681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02003 7 18368801 18372315 Pste7g02003 7 18368801 18372315 ECH
Pste7g02003 7 18368801 18372315 Pste8g01495 8 8203876 8207064 PCT