Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02487 CTCTCATTCCTATTGCGACTCACTTCTCTCTCCTCTCTCTTCACCTTTCTCTTTCTCTCTCTTTCAGATTTCTGTCTCTCTCATCTTTCTCTCTCCGGAAGGGCAAACCCTAAAGACCGTTTGCACCCACCAATTGTCATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTACTATGAACCCTTTAGAGGGGGACATCTTGGTCTGCAGCTCATGCCTGGTATGACTGAACGAGACACCAAACCATTTCTGCCTGGTCGTGATCCGGCCATGTTAATGGGTGCAAATGCGACTTTTCATCCTCGAGATTGCGTTGTTTCCGAAGCACCAATGCCATTGAACTATGTTAGAGATAATTGGATTAACCAGAGAGATAGGTTTTTTAATATGCAGCAGCCCCCAAATCCTAATTATGCTGTTCTTCCAGAAACATCAGCAGCTCCTAACTTGCAAATTATACAGCCACCTGATACTTCAAGAGATGAGAAAGTGGATAGAGTTGGAGAGTTAGTTGTAAAAAAGGAAGGTGGCCAGTCAAAGAAAAGACAAACTAAGGGTGCTCTGGCCACTCCAAAAGCTAAGAAACCTAGGAAGCCAAAGGATAATGGCAATGTTCCAGTTCAACGAGTGAAGCCGCCAAAGAAAACAATGGAGCTTGTAATTAATGGAATTGATATGGACATTTCTGGTCTGCCCATTCCAGTTTGTTCATGTACTGGGGCTCCTCAGCAATGTTATCGTTGGGGCTGTGGAGGTTGGCAATCAGCTTGTTGCACCACAAATGTGTCTATATATCCTTTGCCGATGAGCATGAAAAGGCGTGGTGCGAGGATAGCTGGGCGGAAAATGAGCCAAGGTGCTTTTAAAAAGGTTTTGGAGAAACTTGCTGCTGAAGGTTATAATTTTTCTAACCCTATTGATCTGAAGACTCATTGGGCCAGACATGGCACCAACAAGTTTGTCACTATCAGGTAGATAGGTGCTGCTGAGACACATGACATTTGGTCTGTTTCACATGTATATACACCTGTGTGGTCTCACACAGATGTTGAGTTATTTGTTATCCAAGAATTTTCTGTTGTGGTACTTCTACCTAAAATTTGGATCTTCCAGTTCTTTTGTTCTTTTTTCCCTCTTCGGCTTTTATGTGATAAGGGACAACCATGTTATATGACATCAACATTTATGTAGATGAGTTATAACTAGATAGACTAGTTTTGGATAATTCTCAGTCACATTTTTAATTTAAATTTGTCCAGA 1263 0.4204 LSFLLRLTSLSSLFTFLFLSLSDFCLSHLSLSGRANPKDRLHPPIVMDDDVLNMPNWGYYEPFRGGHLGLQLMPGMTERDTKPFLPGRDPAMLMGANATFHPRDCVVSEAPMPLNYVRDNWINQRDRFFNMQQPPNPNYAVLPETSAAPNLQIIQPPDTSRDEKVDRVGELVVKKEGGQSKKRQTKGALATPKAKKPRKPKDNGNVPVQRVKPPKKTMELVINGIDMDISGLPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFSNPIDLKTHWARHGTNKFVTIR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02487 325 MobiDBLite consensus disorder prediction 174 210 - -
Pste3g02487 325 SMART GAGA_bind_2 47 325 IPR010409 -
Pste3g02487 325 Pfam GAGA binding protein-like family 47 325 IPR010409 -
Pste3g02487 325 PANTHER - 47 325 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02487 Pste-Chr3 17679249 17681184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02487 47 325 BBR or BPC Transcription factor family AT2G01930 57.383 8.83e-107 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pste3g02487 GAGA_bind 7.5e-105 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02487 3 17679249 17681184 Pste3g02487 3 17679249 17681184 ECH