Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02251 AATGGCTGCCTCTTCCATGGCTCTCTCCTCCCCATCGTTGGCCGGCAAGGCCGTGAAGCTGGCCCCATCAGTCCCAGAAGTCGGGAGGGTAAGCATGAGGAAGACCGTCACCAAGCAGGCCTCCTCCGGAAGCCCATGGTACGGCCCAGACCGTGTGAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCCTCCTACCTCACCGGTGAGTTCCCCGGGGACTACGGCTGGGACACTGCTGGCCTTTCCGCCGACCCAGAAACCTTCGCCAAGAACCGCGAGCTGGAGGTTATTCACTCCAGGTGGGCCATGCTCGGAGCCTTGGGCTGCGTCTTCCCGGAACTCTTGTCCCGCAACGGTGTTAAATTCGGCGAGGCCGTCTGGTTCAAGGCTGGCTCCCAGATCTTCAGCGAGGGTGGGCTCGACTACTTGGGCAACCCAAGCCTGATCCACGCTCAGAGCATCCTCGCCATCTGGGCCACCCAGGTTATATTGATGGGCGCCGTTGAAGGTTACCGTATTGCCGGTGGTCCTCTCGGTGAGGTCACCGACCCACTTTACCCAGGTGGCAGCTTTGACCCATTGGGCCTCGCTGATGACCCCGAGGCCTTCGCTGAGCTCAAGGTCAAGGAAATTAAGAACGGTAGATTGGCCATGTTCTCTATGTTCGGATTCTTCGTTCAGGCCATTGTTACCGGAAAGGGTCCTCTTGAGAACCTTGCTGACCACCTCGCTGACCCTGTCAACAACAACGCCTGGGCCTACGCCACCAACTTCGTCCCCGGAAAGGTATACGTGGATGTGGTTAGGTCACCATATCACAACCACACAAAAATGAACAACAAAACTCGACCATTATCGGTGTCATCGCATTCCAATTTCTTCTCCTCACTAAAACAGGTTGAAAAAAGGTTAAAATTGGAGCAAACATCACCGGCAACAGAATCTCATATACAAGAAAGCACTTTGGGTTCTCCCATTTTCCTCCACTCCATTGGTAGCCTGAATTGTCCCACCCAAGGTAGCAGTGAACCTCCTCAAGCATTCCTCTCTGTTTCCCAAGAGTTTCCAACAATCCAACAAGACCCTTCTCAAACAGATCATGCCACTCCTGAAAATGAAGCTCAAGATGATGATGATGACATTGAACGGTTAATGCAGCTTTTGGGGCTATCCGAGGAACAAGAACAAGGGGATGGCTTTGATGATGTTGATTCATGTCACTGTGAAGGTGGGTTTTATTCTAAAATTGTTGGTGTGGAAGGGCCCAAGTGTAGGAAGGAGGTGCTGAGGCTAGATGGGTGGATCAAGCACTTTCTTAATGGTGGTGGGGAGGAGAAGCAAGAGCCTTTTAGATTGGCACACCTGCTTTTAGGGAAAGCTGCTTTTATTTCTGATGGTGCTTCTGGAGAATTGGACTTTCCTTCAACCATTCAAGAATTTCTTCATACTGATCCTCCCTTTCTCCTTCAGAAAACTCTGCTCCAAGGATTGATTGGTGGTGTTTTACCATTAGTGTTGTTTGAAGCTTCACAAGGGAAGATAATACCTCATTCATATAGGGTCAGCAAAGGATCCACAATATTGGCTACTTGTTCTTTTCCATTTGCAAGGGCTTTTGTCACTACTTCACGCAGAGGGATTGGCAAACCATCCTCTTCTGAGAGTTCTGTCGGCCTTCTTTTCGTTAGACATTCCATTACTATGATACCAAAGCTGAACACATCGGCTTTA 1732 0.5069 MAASSMALSSPSLAGKAVKLAPSVPEVGRVSMRKTVTKQASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGKVYVDVVRSPYHNHTKMNNKTRPLSVSSHSNFFSSLKQVEKRLKLEQTSPATESHIQESTLGSPIFLHSIGSLNCPTQGSSEPPQAFLSVSQEFPTIQQDPSQTDHATPENEAQDDDDDIERLMQLLGLSEEQEQGDGFDDVDSCHCEGGFYSKIVGVEGPKCRKEVLRLDGWIKHFLNGGGEEKQEPFRLAHLLLGKAAFISDGASGELDFPSTIQEFLHTDPPFLLQKTLLQGLIGGVLPLVLFEASQGKIIPHSYRVSKGSTILATCSFPFARAFVTTSRRGIGKPSSSESSVGLLFVRHSITMIPKLNTSAL 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02251 577 SUPERFAMILY Chlorophyll a-b binding protein 45 259 - -
Pste3g02251 577 FunFam Chlorophyll a-b binding protein, chloroplastic 53 255 - -
Pste3g02251 577 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 262 IPR001344 GO:0009765|GO:0016020
Pste3g02251 577 MobiDBLite consensus disorder prediction 358 379 - -
Pste3g02251 577 Pfam Chlorophyll A-B binding protein 62 228 IPR022796 -
Pste3g02251 577 Gene3D Chlorophyll a/b binding protein domain 53 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02251 Pste-Chr3 15796288 15799169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02251 1 262 Chloroplast and Mitochondria Gene Families AT1G29930 88.390 5.61e-170 481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02251 3 15796288 15799169 Pste1g03917 1 20157832 20160804 PCT