Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02231 TTTCTTCTCAATCGATCATATTCTTCACCAATTCGTAGATCTACGATAACACCTTTCAGCTAGGGTTAAATTGGTGTAGTGTGGTAAGATGGGAGGTGGATTTAGAGTGCTTCACCTAGTTAGGCCATTTCTCTCGTTTCTTCCTGAGGTTCAAACTGCTGACAGGAAAGTGCCGTTTAGAGAGAAGGTCATATATACTGTGATCTCTCTCTTCATTTTTCTGGTTTGTAGTCAGCTTCCTCTATATGGGATACACTCAACAACAGGTGCTGATCCATTCTATTGGATGCGTGTAATTCTTGCTTCAAACCGTGGAACTGTCATGGAGCTAGGAATCACTCCCATTGTGACTTCTGGGCTAGTAATGCAACTTCTGGCTGGATCAAAGATCATTGAAGTGGACAACAATGTCCGAGAAGATCGAGCCCTGTTAAATGGAGCACAGAAGCTACTTGGTATTTTAATAGCTGTTGGTGAGGCTGTTGCCTATGTTCTTTCAGGGATGTATGGTAGTGTGGGGCAACTTGGAGTAGGAAATGCCATACTCATCATCATCCAGCTCTGTTTTGCGGGTATAATTGTGATATGTCTAGATGAGCTTCTTCAAAAAGGATATGGTCTGGGTTCTGGAATTTCCCTATTCATAGCTACTAATATCTGTGAAAACATTATATGGAAGGCATTTAGTCCTACCACCATTAATAGTGGACGTGCTGTTATTGCTCTGTTCCATTTGTTGATAACCAGAACAGACAAGGTCCGGGCACTTCGGGAGGCATTCTACCGGCAGAATCTTCCCAATGTGACAAATTTGCTTGCTACTGTCTTGATCTTCCTAATTGTGATATACTTCCAAGGTTTCCGTGTGGTCTTGCCTGTAAGGTCAAAGAATGCTCGTGGACAGCAGGGTTCATATCCAATCAAATTGTTTTATACCTCCAACATGCCCATCATTCTTCAGTCTGCTCTTGTTTCCAACCTCTACTTCATCTCCCAGCTGCTCCACCGTAAGTACAGTGGAAACTTCTTTGTAGATCTATTGGGAAAATGGAAGGATTCTGAATATGGAGGTGGTCAGTCTGTTCCTGTTGGTGGTATTGCATACTATATCACTGCACCATCCAGCTTAGCTGATATGGCAGCCAATCCCTTCCATGCTCTGTTCTATCTTGTGTTTATGCTTTCAGCCTGTGCCTTGTTCTCCAAAACATGGATTGAAGTCTCTGGTTCATCTGCTAGAGATGTTGCCAAGCAGCTGAAGGAACAACAAATGGTTATGCCTGGACACCGTGAGTCAAACTTGCAGAAAGAGCTGAATCGATACATTCCCACTGCTGCAGCATTTGGAGGCATGTGTATTGGTGCCCTGACAGTGCTGGCAGATTTTATGGGGGCCATTGGTTCTGGGACAGGGATATTGCTTGCAGTAACGATCATATACCAATACTTTGAGACGTTTGAGAAAGAAAGAGCTAGCGAGCTTGGGTTCTTTGGATTCTAAGTTCTGCTGAGCAAATAATGTCAGGCGACTCAAAGGAGCTCTCCCGCACCCTTGTTTGAGGGTTCATTATACTTCTAGGACGTTTAACATCGTAAGGGAGGAGGACATAGACTAGTTTGTTATCATTTTGTAATTTTCATTTTTTCCCTTTCAACTGAGGAAGTATGTAGTAGTACATCGTTGTTAACATTTTTTGTTTTCCTCGAAATATACTTGTGTTTATCATTGAATCTATATGAAATTCTGACGCAAAGGTTTAAAGAACTGGATTTTAAATTTATCATATCAGCTCAGTTCGAT 1801 0.4214 MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIIQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLHRKYSGNFFVDLLGKWKDSEYGGGQSVPVGGIAYYITAPSSLADMAANPFHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02231 470 FunFam Transport Sec61 subunit alpha isoform 2 9 468 - -
Pste3g02231 470 ProSitePatterns Protein secY signature 1. 77 96 IPR030659 -
Pste3g02231 470 Pfam SecY 77 453 IPR002208 GO:0015031|GO:0016020
Pste3g02231 470 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 18 464 IPR002208 GO:0015031|GO:0016020
Pste3g02231 470 Pfam Plug domain of Sec61p 42 76 IPR019561 -
Pste3g02231 470 SUPERFAMILY Preprotein translocase SecY subunit 10 460 IPR023201 -
Pste3g02231 470 PIRSF SecY_Sec61alpha 8 465 IPR002208 GO:0015031|GO:0016020
Pste3g02231 470 Gene3D SecY subunit domain 9 468 IPR023201 -
Pste3g02231 470 NCBIfam preprotein translocase subunit SecY 31 461 IPR002208 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02231 Pste-Chr3 15625472 15629504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02231 1 470 Miscellaneous Gene Families AT2G34250 91.807 0.0 889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02231 3 15625472 15629504 Pste3g02231 3 15625472 15629504 ECH
Pste3g02231 3 15625472 15629504 Pste1g03916 1 20142912 20150736 PCT