Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00164 GTTGAGTACGTAAATTCTCCCGGAAGCAACCCTGACAGTGTCCTAAACAAAAGAAAGAGGCATCAGAGTGAGGTAAAGTGAAAAAGAAAGAGGAAGAAGGCAGGGTACGTGAGGTGAGGCATGGCAGAGGCAAACATGCATCTCCTAATGATCCTCTTCATTGTGGCAGTAGTGAGGGAGTCAAAAGCCGGCATGGAAAGCTTCATATTCGGAGGGTGCTCACAGGGGAAGTTCACGCCTGGTTCGGCCTACGAAAACAGCGTGAACGCGCTTCTGACATCGGTGGTCAACTCGGCGGCCTTGGCTAACTACAACAACTTGAGCGTGCAGGTGCAGGGGAACTCGGACACAGTGTACGGCCTATTCCAGTGCCGAGGGGACCTGAACAACGAGCAGTGCTCGCGGTGCGTGGGACGTGCCATCACTCAGCTCACCACCCTCTGCTTCGCCTCATGCGGGGCGGCGTTGCAGCTCGAGGGCTGTTTGGTAAAGTACGACAATGTGAGCTTCATCGGGGTCGAGGACAAGACTTTGATCACCAAAAAATGTGGGACCGGGGCCTCCACGTCCGATGCCTTGAGCCAAAGGGATGCCGTGCTCGCCTATTTGCAGACCTGGGATGGGCCTGGGCCTGGCCCTTACAGGATCACCCGCTTTCGTGACTTCCAGGGACTCGCTCAGTGCACTGGCGATTTGACTCCCTCCCAGTGCCAGGATTGCCTTTCTGATTCCATCCAACGCTTGAAAACCGACTGCGCTCCCTCCCCCTCTGCCGAGATCTACTTGTCCAAGTGCTACTCCCGCTACTCCCAACTCTCCTCTCTAACCATGGAAATTTGGAAACAACAATCACGATCCATGAAACCATATATTTCATCATTTTTCCTGATCCATGGAAAGCACGAACACAATCAAAAGGCATATTACACTTACTACAATGATAGCAGTCACAATGATGATGAGATCGAGAAGACACTGGCTATACTGATTGGACTCATTGCTGGGGTTGCTCTAATAATCGTTTTCCTTTCCTTCTTGTCCAAGGTGTGCGAAAAGCACAAAGGTATGATTTTCACGGTGGTAAATAAAGAACATAATATGTGCACAGCACTGGGATTGAACTTTTGCCCTTGCTTTTCCCTGACTTCTAAACTTGTAGTTTTTAATTTCCGGAATGGTTATGATGCCTGGAGGCTGGAACTGATTGGCTGCATCAGTACGCTTCTGGTTTATCAGTCCATTAATCCTTCATTATGTACATTTAAAGTTCCTTTTGGCTTTCCTTCTTATAGGTCGGCTTTATGGTTTGCATTTATCATCTCTGTTGAATTTCGGAGGAGTCATTGA 1347 0.4922 MAEANMHLLMILFIVAVVRESKAGMESFIFGGCSQGKFTPGSAYENSVNALLTSVVNSAALANYNNLSVQVQGNSDTVYGLFQCRGDLNNEQCSRCVGRAITQLTTLCFASCGAALQLEGCLVKYDNVSFIGVEDKTLITKKCGTGASTSDALSQRDAVLAYLQTWDGPGPGPYRITRFRDFQGLAQCTGDLTPSQCQDCLSDSIQRLKTDCAPSPSAEIYLSKCYSRYSQLSSLTMEIWKQQSRSMKPYISSFFLIHGKHEHNQKAYYTYYNDSSHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKHKGMIFTVVNKEHNMCTALGLNFCPCFSLTSKLVVFNFRNGYDAWRLELIGCISTLLVYQSINPSLCTFKVPFGFPSYRSALWFAFIISVEFRRSH 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00164 408 Pfam Salt stress response/antifungal 182 231 IPR002902 -
Pste3g00164 408 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Pste3g00164 408 Gene3D - 142 233 IPR038408 -
Pste3g00164 408 Gene3D - 25 130 IPR038408 -
Pste3g00164 408 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 9 310 - -
Pste3g00164 408 FunFam cysteine-rich repeat secretory protein 3 25 130 - -
Pste3g00164 408 ProSiteProfiles Gnk2-homologous domain profile. 26 130 IPR002902 -
Pste3g00164 408 ProSiteProfiles Gnk2-homologous domain profile. 134 234 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00164 Pste-Chr3 705350 710587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00164 4 229 Pollen Coat Proteome AT4G20670 23.529 3.87e-13 67.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00164 3 705350 710587 Pste3g00164 3 705350 710587 ECH