Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00124 GAGTGCAAGCAACACACATTCGCAATCAACCCTTCCTTTGTGCCCTTCCACTAACCTCTCTCTTCGTTAATGCAAAATAAAGTTTCACACTTTCATCCTTTTCTGCAACTGGGTTTCAGACATGGAAGAAAGCTGAAAAGTGAAAAACAACAACCCTGTCTTTGTTTTTTTGTTTGTTGAATTGAGACCGAGAAACAGAGAAAGTGAATGATGGAGACGAAGGGTGTGCGGTTCTTAGCGTACCAATCAATATTTTCGAGCGTTGGATCTGGGAACTTTGATGGGGTGAAGAAACTGATCGAGAAAGTGAAGAAGGAAGAAGGGTCATCGCTCTCTGATGTGATGTCTCTTCAGAACGATACTGGAGAAACTGCGCTTTACATCGCTGCGGAGAATAATCTGCAAGAGATTTTCAGCTTCTTGCTAAGCTTTTGTGACTTTGAAATAGTTAAGATTCGTTCCAAGTCTGATATGAACGCCTTTCACGCTGCTGCCAAGCGTGGCAATCTAGATATTGTGAGGGAGCTTTTGAATACTTGGCCTGAGGTTTGTAAGTTATGTGACTCCTCAAACACCAGTCCTCTATATTCTGCTGCAGTTCAAGATCACTTGGATGTGGTGAATGCTATCTTGGATGTCAATGTTGGTTCCATGTTTATAGTTAGGAAAAATGGCAAAACTTCATTGCACAATGCTGCTAGGTATGGCGTCCTTCGTATTGTAAAAACACTTATTGCAAGGGATCCAGGAATAGTATGCATCAAAGATAAAAAGGGTCAAACTGCACTGCATATGGCTGTCAAAGGACAATGTACTTCAGTGGTGGAGGAGATATTACTAGCTGATCCTTCTATATTGAATGAGCGAGATAAGAAGGGTAATACAGCTCTTCACATGGCTACAAGGAAATGCCGTTCGCAGATAGTGAGCCTTTTGCTAAGCTATTCTGCTATGGATGTTAATGCCATCAACAAGCAGAAGGAAACTGCCTTGGATTTGGCAGATAAACTGCCATATGGAGATTCTGCTTTGGAAATCAAGGAAGCCCTTGCAGAATATGGTGCTCAGCATGCCAGATATGTTGGTCAATTAGATGAAGCAATGGAACTTAAAAGAACTGTGAGTGATATAAAGCATGAGGTGCAGTCACAACTTATACAAAATGAAACAACTCGCCGACGGGTTTCTGGTATTGCCAAGGAGTTGAAGAAACTTCATAGAGAAGCAGTTCAAAACACTATTAATTATGTCACAGTGGTTGCGGTCCTTTTTGCCTCAATAGCATTCTTGGCCATCTTCAATTTGCCGGGTCAGTATATAATGAAGGAAGGACCAGGGGCAGAGATTGGGAAAGCTAATATAGCCGATCATGTTAGTTTCCAAGTTTTCTGCCTTCTGAATTCTACATCTCTTTTCATTTCGCTTGCGGTTGTTGTAGTTCAAATCACGTTAGTAGCCTGGGACACGAGGGCTCAAAAGCAGATTGTGTCAGTGGTTAACAAGTTGATGTGGGCTGCATGTACTTGCACTTGTGGTGCTTTTCTGGCAATATCTTTTGAGGTTGTTGGAAATAAGACATGGATGGCTATCACCATCACCCTTTTGGGGGTACCTCTTCTAGTTGGCACTCTAGCAAGCATGTGCTACTTTGTTTTTCGACAACATTTTGGGATTTTCAGAAATGATTCCCAGAGACGCATCAAGAGGGCAAGTGGAAGCAAATCTTTCTCATGGTCTTACTCTGCAAATATATCAGATTTGGATGAATACGATTCTGACATTGAGAAGATCTATGCCCTGTGAGTCAAGAATCATGTTTAACACCACACGATAGAAGAGCAATGTTTCAACCTTTTAACTGAAACTGTTATACCACTGCTAAGTGATAAGCTTGGCTCACTGGGATTTCATCATTCATCTCGAGCAGGCAGTTTTTTATTTCAAGCTGTACTACTAGGCAAATCGGTTGGATTTGGATTTGCTAGTATATGATTGTAGGTAATAATCAACACTTGTAGATTTATGTATATGTACTAAAATATATAGAAAGGAAGTGTACTGCTCAAGTTTGATTTTGGAACGAGCATTTTCGTTTTCAGATCCCCTAAGTTTTCATCTGCTTTATATTGCACCATGCAAGAAACTAGAGCTTCCACTAATGACAATTTACAATTTGCATACAATTGGTGGTTGCTTGGGCTTTATTTATAAGAGCTAAAAAGAAAGTTTACGAAAATAAACTTACCGAAAGGCAAAAGGCGTCCTCGTTAATCATTCTAGGGTCGTATAATCTCACTGAATTGATTCAATTTTTTTATACTACGCTTGTAATACTAAATTTTGAAAGGCAAATTCAACACTTATTCGAAAAATCTAAACTTGAGTCAAATTAAACAGCAGGCAATCACACCGTCCTG 2417 0.4001 MMETKGVRFLAYQSIFSSVGSGNFDGVKKLIEKVKKEEGSSLSDVMSLQNDTGETALYIAAENNLQEIFSFLLSFCDFEIVKIRSKSDMNAFHAAAKRGNLDIVRELLNTWPEVCKLCDSSNTSPLYSAAVQDHLDVVNAILDVNVGSMFIVRKNGKTSLHNAARYGVLRIVKTLIARDPGIVCIKDKKGQTALHMAVKGQCTSVVEEILLADPSILNERDKKGNTALHMATRKCRSQIVSLLLSYSAMDVNAINKQKETALDLADKLPYGDSALEIKEALAEYGAQHARYVGQLDEAMELKRTVSDIKHEVQSQLIQNETTRRRVSGIAKELKKLHREAVQNTINYVTVVAVLFASIAFLAIFNLPGQYIMKEGPGAEIGKANIADHVSFQVFCLLNSTSLFISLAVVVVQITLVAWDTRAQKQIVSVVNKLMWAACTCTCGAFLAISFEVVGNKTWMAITITLLGVPLLVGTLASMCYFVFRQHFGIFRNDSQRRIKRASGSKSFSWSYSANISDLDEYDSDIEKIYAL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00124 531 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 22 510 - -
Pste3g00124 531 Gene3D - 11 303 IPR036770 -
Pste3g00124 531 ProSiteProfiles Ankyrin repeat profile. 223 248 IPR002110 GO:0005515
Pste3g00124 531 SMART ANK_2a 223 253 IPR002110 GO:0005515
Pste3g00124 531 SMART ANK_2a 87 116 IPR002110 GO:0005515
Pste3g00124 531 SMART ANK_2a 155 184 IPR002110 GO:0005515
Pste3g00124 531 SMART ANK_2a 121 151 IPR002110 GO:0005515
Pste3g00124 531 SMART ANK_2a 52 82 IPR002110 GO:0005515
Pste3g00124 531 SMART ANK_2a 189 218 IPR002110 GO:0005515
Pste3g00124 531 ProSiteProfiles Ankyrin repeat region circular profile. 223 248 - -
Pste3g00124 531 ProSiteProfiles Ankyrin repeat region circular profile. 155 176 - -
Pste3g00124 531 Pfam Domain of unknown function 339 450 IPR026961 -
Pste3g00124 531 ProSiteProfiles Ankyrin repeat profile. 155 176 IPR002110 GO:0005515
Pste3g00124 531 Pfam Ankyrin repeats (3 copies) 21 108 IPR002110 GO:0005515
Pste3g00124 531 Pfam Ankyrin repeats (3 copies) 121 178 IPR002110 GO:0005515
Pste3g00124 531 Pfam Ankyrin repeats (3 copies) 187 253 IPR002110 GO:0005515
Pste3g00124 531 SUPERFAMILY Ankyrin repeat 15 284 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00124 Pste-Chr3 532676 536689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00124 2 531 Miscellaneous Gene Families AT2G01680 67.472 0.0 722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00124 3 532676 536689 Pste3g00124 3 532676 536689 ECH