Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00099 AGAGAGAGAGAGAGAGAGAGAGATTTTGTTAATTTGTTATGGCCATGGCAAAAGAGAAAGAGGAGGTTCGGAACAGTGGCAAGAGGTTGAAATGCACAAGGAATGATAAAGACGAAGACGAAGAGGAAGAGGAAGATGCAGAAGAAAGTGAGCTTCCTTTAAAGGCTGGATTGTTCTTCTACCCAACGACACCCACTTCCTTTGTTGTGTCTGATGCTCTCGAACCCGATTTTCCCATCATTTATGTCAACAAGGTCTTTCAAATCTCCACTGGATACCGCGCCGACGAGGCCCTCGGTCGCAACTGTCGGTTCTTACAGTATAGAGATCCTCTGGCTCAGAGACGGCACCCTTTGGTGGATCCTGTTGTTGTGTCTGAGATTAGAAGATGTCTTGAGGAAGGCGTCGAGTTCCTAGGTGAACTTCTAAATTTCCGAAAGGATGGTACTCCTTTGGTGAACAGACTGAGACTTGCACCAATTCATGATGATGATGGGACTGTGACACACGTAATAGGTATCCAACTCTTTTCTGAGGCAAATATAGATCTGAACCGTGTCTCATATCCAGTTTTCAAAGAGACTTGCAATCAAGATTTTGATAAGAATGGTAAATATTCTCCTAAGAGTGGACAATCATTGTACAGTCAACATCTAGAGATATGCGGTATTCTTCGGCTTTCTGATGAAGTCTTGGCACACAACATTTTGTCACGCTTGACACCAAGGGATGTTGCATCCATTGGCTCTGTATGCAGGAGGATCCGTCAATTAACAAAGAATGAGCATGTCAGGAAGATGGTATGTCAAAATGCATGGGGCAAAGAAGTAACGGGCACATTGGAACTGATGACTAAGAAGTTAGGATGGGGCCGTCTGACTCGTGAACTGACCACCCTCGAGGCTGTTTGTTGGAGAAAACTGACAGTGGGAGGTGCAGTGGAGCCTTCACGCTGCAATTTCAGTGCTTGTGCTGCAGGAAACCGACTTGTATTGTTTGGAGGTGAAGGAGTGGATATGCAACCTATGGATGACACTTTTGTGCTAAATCTTGATGCTAAAAATCCAGAATGGCGCAGGGTTAGTGTGAAGTCCTCCCCACCCGGAAGGTGGGGCCACACACTCTCATGCTTAAATGGTTCTTGGTTGGTGGTTTTTGGTGGGTGTGGTAGGCAAGGATTGCTCAATGATGTGTTTGTGCTTGATTTGGATGCTCAACAGCCTACATGGAGGGAAGTCTGTGGTGGAACCCCACCACTTCCTAGATCATGGCACAGCTCTTGCACAATTGAAGGGTCCAAATTGGTTGTCTCCGGTGGATGCACAGATGCCGGGGTACTTCTTAGTGACACATATTTACTGGACCTCACAACAGATAATCCAACATGGAGAGAAATTCCAACTTCATGGGCTCCTCCTTCTCGGTTGGGGCACTCACTCTCAGTGTATGGGAGGACAAAAATTCTCATGTTTGGCGGACTTGCCAAGAGTGGACACTTGCGGTTACGATCAGGAGAGGCGTTTACAATTGACTTAGAAGATGAACAGCCACATTGGAGGCAACTAGAATATGGCGCATTCACGGGGTCTGCAAGTCAAAGTGCTGTTGTTCCTCCTCCAAGGCTGGATCATGTTGCTGTCAGCATGCCTTGTGGAAGGATTATTATATTTGGAGGTTCCATTGCTGGTCTTCACTCACCCTCGCAGCTCTTTCTTTTGGACCCTTCTGAAGAGAAACCATCCTGGAGGATCCTCAATGTTCCAGGGCAACCACCTAAATTTGCTTGGGGTCACAGCACCTGTGTGGTTGGAGGGACTAGGGTGTTGGTGTTGGGTGGACACACTGGGGAGGAATGGATATTGAATGAGTTGCATGAGTTATGCTTGGCAAGTCGACAAGAGTCCGATATGTGAAGTGTCACTCTTCTACTAAAGACAATATTTTTGGTTGCAAAGAAGGTTTTGGATTGATTTCCTTCAGCAGTTTGGCTTTGTATATGAACTATTATATAGTTGTTATATGACATGACATGTGTATTACCGGTGCTTTTTGAATGATATGTGATGTCATATGGATTCTCTACTGTCTATGTCATTAGGAAACAAACCTCTGTACATCTAAGAGTTCTTGCTGTTGTATCATTGCTCCTTATTCTTTTACAATTTGTTTTGTTAATCACTAATTTGTTTATTATTTTTTATATTAACTTCTATACAGATAAGGATTTACAAGATTAGTGCAATAACAAAGAAAAGAAGATGGAGAAGAG 2269 0.4425 MAMAKEKEEVRNSGKRLKCTRNDKDEDEEEEEDAEESELPLKAGLFFYPTTPTSFVVSDALEPDFPIIYVNKVFQISTGYRADEALGRNCRFLQYRDPLAQRRHPLVDPVVVSEIRRCLEEGVEFLGELLNFRKDGTPLVNRLRLAPIHDDDGTVTHVIGIQLFSEANIDLNRVSYPVFKETCNQDFDKNGKYSPKSGQSLYSQHLEICGILRLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGKEVTGTLELMTKKLGWGRLTRELTTLEAVCWRKLTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAQQPTWREVCGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDNPTWREIPTSWAPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAFTIDLEDEQPHWRQLEYGAFTGSASQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQESDM 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00099 624 FunFam Putative LOV domain-containing protein 282 487 - -
Pste3g00099 624 SUPERFAMILY Galactose oxidase, central domain 292 609 IPR011043 -
Pste3g00099 624 Gene3D PAS domain 48 173 - -
Pste3g00099 624 FunFam Putative LOV domain-containing protein 488 620 - -
Pste3g00099 624 Pfam PAS domain 61 161 IPR000014 -
Pste3g00099 624 Pfam Kelch motif 529 576 IPR011498 GO:0005515
Pste3g00099 624 Gene3D - 206 255 - -
Pste3g00099 624 Coils Coil 17 37 - -
Pste3g00099 624 Gene3D - 282 507 IPR015915 GO:0005515
Pste3g00099 624 CDD PAS 51 161 IPR000014 -
Pste3g00099 624 Pfam F-box domain 211 248 IPR001810 GO:0005515
Pste3g00099 624 SUPERFAMILY F-box domain 203 263 IPR036047 GO:0005515
Pste3g00099 624 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 36 618 - -
Pste3g00099 624 MobiDBLite consensus disorder prediction 1 24 - -
Pste3g00099 624 NCBIfam PAS domain S-box protein 66 161 IPR000014 -
Pste3g00099 624 SUPERFAMILY PYP-like sensor domain (PAS domain) 62 162 IPR035965 -
Pste3g00099 624 FunFam Adagio protein 1 44 173 - -
Pste3g00099 624 CDD F-box_AtADO-like 210 256 - -
Pste3g00099 624 MobiDBLite consensus disorder prediction 1 38 - -
Pste3g00099 624 Pfam Galactose oxidase, central domain 370 417 - -
Pste3g00099 624 Pfam Galactose oxidase, central domain 419 470 - -
Pste3g00099 624 Pfam Galactose oxidase, central domain 305 355 - -
Pste3g00099 624 ProSiteProfiles PAS repeat profile. 67 122 IPR000014 -
Pste3g00099 624 Gene3D - 508 623 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00099 Pste-Chr3 440762 443714 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00099 50 163 AGC Kinase Gene Family AT5G58140 43.860 8.43e-22 98.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00099 3 440762 443714 Pste3g00099 3 440762 443714 ECH