Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00043 TTCTCAACCGCACTTTTCTTGCAACATGAGCTGCACTACAATTTTACATTATATGATTTTATTACGTTTGATGATAATACGGATCAAACATTGTCTTTCATTCTGGAATTGTTACTTCCCTCAATTTGCATTAAATTGGTGTTTTCATCTTATAATACGGCTGGTAAGAATGAAGAAGAGGAGTTCAACACTGGACCACTATCTGTCCTGATGATGAGTGTTAAAAATAATACTCAGGTACTGATAAATTGTCGGAACAACAAGAAACTTCTGGGTCGTGTAAGGGCTTTTGACAGGCATTGCAATATGGTTCTTGAAAATGTCCGAGAGATGTGGACTGAGGTGCCAAAGACTGGTAAAGGAAAGAAAAAGGCCCAGCCAGTGAACAAGGATAGGTTCATCAGCAAAATGTTCCTCCGTGGAGATTCTGTCATTATTGAACCCCAAATGAGTTTGTGTCATCAACTTGTAGAAGATAAAAGTCATCAACTTGTAGAAGATAAATGTACCATCCGCTTTAATGAGGGTTTC 531 0.3804 FSTALFLQHELHYNFTLYDFITFDDNTDQTLSFILELLLPSICIKLVFSSYNTAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIEPQMSLCHQLVEDKSHQLVEDKCTIRFNEGF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00043 177 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 53 146 IPR027248 GO:0008380|GO:0030532
Pste3g00043 177 Gene3D - 60 152 - -
Pste3g00043 177 SUPERFAMILY Sm-like ribonucleoproteins 65 146 IPR010920 -
Pste3g00043 177 SMART Sm3 70 148 IPR001163 -
Pste3g00043 177 Pfam LSM domain 73 145 IPR001163 -
Pste3g00043 177 CDD Sm_D2 62 146 IPR027248 GO:0008380|GO:0030532
Pste3g00043 177 ProSiteProfiles Sm domain profile. 67 153 IPR047575 GO:0003723
Pste3g00043 177 FunFam Small nuclear ribonucleoprotein Sm D2 60 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00043 Pste-Chr3 207061 208394 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00043 3 207061 208394 Pste3g00043 3 207061 208394 ECH