Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02579 CCTAGCCATTGCACCAGGGAAAGACTTCATTTCCTGATAGGATCTCAACTGCCTCTCTCTAATTCTTCATAACCTCTCTCTCTCTCTCTCTCTCTCTCCCCTTGCTGTGCTTCTTTTATGGACAAAGGATGGGGACTCACCCTTGATACCTCTTCCTCTCCATCATTTCCTTCCAACCACCCTCCCACCAACGACACCATGTTTCCTCTCCTCGGTTTCCCCGTCAACCTTAGCCGCGCCTCCAAGGATGACCACCAAACCCCCAAACTTCTCGGTGAAGTCGACTTCTTCTCTGACAGAAACAAATCAACCCCTCCTCCCTCTCTCCTCCACCACGTTAAACCCCACATCGTCAAGAAGGAAATTGATGAAACTCCTCTTCACGTTAATACTGGTTTACAGCTCCTTACTGCCAACACCGGCAGTGACCAATCTACCGTCGATGATGGGCTTTCATCCGATGCTGAAGATAAGCGAGCCAAATCCACTGAGCTTGCTCACTTGCAAGTGGAGCTTCAACGCATGAACGCAGAGAACAACAAGCTGAAAGAGATGCTCAGCCATGTGACCGGTAACTACACGGCCTTGCAGATGCATCTCATGACATTAATGCAACAGAACCAGCGCACTGAAAGCACGGAAAATGAGGTTGTTCAAGGAAAGGTTGAGGATAAAAACCACGATATTGGTGGAGGGAAGGTGCCTAGACAGTTCCTTAATATAGGTCCCAGTGGCACCACAGCCGAAGTAGATGATCAAGTTTCTGATTCTTCTTCCGATGAAAGAACACGATCGAGCACACCTCAGAACAATAACATTGAAGTTGCTGCGAGAAATAATAATGGTAAAACCGAGAGGGAAGAGAGTCCAGACTCAGAATCACAAGGTTGGGCTGCCAATAAGCTGCAGAAAGTGAACCCTTCCAATTCTGTGGATCAATCCACCTCAGAAGCCACAATGAGAAAAGCTCGTGTCTCAGTCCGTGCCCGATCAGAAGCTCCCATGATCAGTGATGGGTGCCAATGGAGAAAATATGGACAAAAAATGGCCAAGGGAAACCCGTGTCCTCGAGCATACTACAGATGCACAATGGCAGTTGGTTGCCCAGTTCGCAAACAAGTGAGTTTTTCTGATCAATCATCGCCTATGATTATCGTTCAACGTTGTGCGGAGGATAGAACAATTTTGGTGACAACATATGAAGGCACACATAACCATCCACTGCCACCTGCTGCTATGGCCATGGCATCAACCACCACAGCTGCTGCTAGCATGTTGCTTTCAGGGTCAATGTCCAGTGCAGATGGGATAATGAACCCAAATTTGCTAGCTAGAGCAATTCTTCCTTGTTCTTCAAGCATGGCAACACTTTCAGCTTCAGCACCATTCCCCACTGTGACTTTGGACCTCACACACAACCCAAACCCATTACAATTTCAAAGGCCTGCTGCTCCATTCCAAGTGCCCTTCCTTCCAGGGCAGCCTCAAAACTTTGGGTCCGGAGTAACCCCAATTGCACAAGCACAAGCGCTTTATAACCAATCTAAATTTTCTGGTCTTCAGTTATCTCAGGAAGTAGGATCTTCCCAATTAGCCCCACAGGCTCCTAGACCACCCTTACAGCCAAGCCAACAGCCCTCACTAGCTGACACAGTCAGCGCCGCCGCCACCGCCATCACTGCCGATCCAAACTTCACCGCCGTTCTCGCTGCGGCCATCTCCTCCATCATCGGCGGTGCTCACAATGCAAACAACAACAACAATACCAACAACAACACAAGCAGGACCACCATCAGCAGCTTTTCAGGAAACTAAAAACCCTTTCGTTTTTGGTCCCATTTTTTGGTTAATATTATTATTCCTTAAACTTTGTATTTTTGTACATGGGTACAAGGGAAAATGAAACCATAAAATGTTCATATTCTTTTTAGTCCATGTCTTGGGATATATTAGATAAGAAAAATGTTTCATTTTTTGTATCATTTGTCTTTGAATAATATTGTATATTGGATTAAAAAAATATCGGGAGTAAATAGACAGAGCCAACGAAGAATCATCTTTT 2062 0.4607 MDKGWGLTLDTSSSPSFPSNHPPTNDTMFPLLGFPVNLSRASKDDHQTPKLLGEVDFFSDRNKSTPPPSLLHHVKPHIVKKEIDETPLHVNTGLQLLTANTGSDQSTVDDGLSSDAEDKRAKSTELAHLQVELQRMNAENNKLKEMLSHVTGNYTALQMHLMTLMQQNQRTESTENEVVQGKVEDKNHDIGGGKVPRQFLNIGPSGTTAEVDDQVSDSSSDERTRSSTPQNNNIEVAARNNNGKTEREESPDSESQGWAANKLQKVNPSNSVDQSTSEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVSFSDQSSPMIIVQRCAEDRTILVTTYEGTHNHPLPPAAMAMASTTTAAASMLLSGSMSSADGIMNPNLLARAILPCSSSMATLSASAPFPTVTLDLTHNPNPLQFQRPAAPFQVPFLPGQPQNFGSGVTPIAQAQALYNQSKFSGLQLSQEVGSSQLAPQAPRPPLQPSQQPSLADTVSAAATAITADPNFTAVLAAAISSIIGGAHNANNNNNTNNNTSRTTISSFSGN 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02579 565 MobiDBLite consensus disorder prediction 488 507 - -
Pste2g02579 565 MobiDBLite consensus disorder prediction 167 280 - -
Pste2g02579 565 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 98 554 IPR044810 GO:0003700
Pste2g02579 565 SMART WRKY_cls 297 369 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g02579 565 MobiDBLite consensus disorder prediction 254 280 - -
Pste2g02579 565 SUPERFAMILY WRKY DNA-binding domain 290 370 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g02579 565 Coils Coil 119 153 - -
Pste2g02579 565 MobiDBLite consensus disorder prediction 7 24 - -
Pste2g02579 565 Gene3D WRKY domain 282 371 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g02579 565 MobiDBLite consensus disorder prediction 221 240 - -
Pste2g02579 565 MobiDBLite consensus disorder prediction 542 565 - -
Pste2g02579 565 MobiDBLite consensus disorder prediction 1 24 - -
Pste2g02579 565 Pfam WRKY DNA -binding domain 299 368 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g02579 565 ProSiteProfiles WRKY domain profile. 292 370 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g02579 565 FunFam probable WRKY transcription factor 31 282 371 - -
Pste2g02579 565 MobiDBLite consensus disorder prediction 177 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02579 Pste-Chr2 26006548 26009086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02579 1 551 WRKY Transcription Factor Family AT1G62300 51.223 3.34e-153 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste2g02579 WRKY 1.3e-20 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02579 2 26006548 26009086 Pste2g02579 2 26006548 26009086 ECH
Pste3g02927 3 22088841 22091590 Pste2g02579 2 26006548 26009086 ECH
Pste1g03054 1 13610757 13613897 Pste2g02579 2 26006548 26009086 ECH
Pste2g02579 2 26006548 26009086 Pste1g03925 1 20216300 20221810 ECH