Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04072 GCAAGCTTTCTTCCCTCATATATTTGAATTCAGGCTCTGCACCACGGCAACGCGAGAAAACGTCCCAAAGCATAAACCCTAGCAGTGAGTGAGCGAGAACGAAGAAGATGAGGGAGGAAGAGATCGAGAAGCTCCGAGGAGTGGTGAGGGACTGCGTGAGCAAGCACCTGTACTCGTCCGCCATCTTCTTCGCCGACAAGGTGGCGGCCTTCACCGCCGACCCCGCCGACATCTACATGCAGGCCCAGGCCCTCTTCCTCGGCCGCCACTACCGCCGCGCCTTCCACCTCCTCAACGCCTCCAAAATCGTCCTCGCCGACCTCCGATTCCGTTACCTCGCCGCCAAGTGCCTCGAGGAGTTGAAGGAGTGGGATCAGTGTCTGTCGATGCTGGGTGGGGCTAAAGTGGATGATGATGGGAATGTTTCTGATATCAAGGATGCGAATGTCATGTACTTGGATAAAGATTGTGAAGATCGTGAAATCAATATATCTTCTGCAATATGCTTCTTAAGAGGCAAAGCATATGAAGCTCTAGAAAATCGCGCCCAGGCCAGACTGTGGTATAAAGCTGCTATAAAAGCGGATCCTTTATGCTATGAGGTATGGCTTCTCCTTAATGTCTTTTATAAGCTCATTGTTAGTATAGGTAATACTGGGATCTGTCTTACTTCTATTACAGCTATTACTGAAGAAACCAAGGTTGACAGAATCGTGTCTCGGCTTGTAGAATCGCACAATTTGGCGGCCTTGGAATGTCTTATTGAGAATCACATGCTTACATGTGAGGAAGAAGCAAAATTGATCTCGTCATTGCAATTTAGTAGTGAGGATGGTTGGCTCTCATCATTTTATTCTTGTTTGATAAAGAAGTATGACAAAGAAAATGTTGTAGAAGCCAAGTTCAGAGATCTTGAGAATGAAAGTTGTAAAAGTGACCAATCAGATTGTTCTTTCTTGCGCACACTGAAATCCAACACTGATCTTTTGGCATGCAAAGCTGAATACTACCATCAGTGTGGTGAATATCAGAAATGTTTTGAGTTAACAAATGTTTTACTTGACAACGATCTCTTCCATCTAAAGAGTACGTTAGTACATCTGGCAGCTTCTGTGGAGCTTGGGCATTCAAATGAACTCTATCTGATGTCATGCAATTTGGTTAAAGATTATCCTCAGATGGCTTTATCATGGTTTGCTGTTGGTTGCTACTACTATTGTATTAAGAAGTATGATCAATCCCGACGTTATTTTAGCAAGGCAACTAGTCTAGATGGAACATTTGCCCCTGCGTGGATAGGCTATGGGAATGCTTATGCTGCCCAAGAAGAGGGTGATCAGGCTATGTCTGCTTACCGCACTGCAGCTAGATTGTTTCCTGGGTGCCATTTACCAACTCTTTACATTGGAATGGAATGCATGCGGACCCACAGCTATAAGCTTGCTGAGCAGTTTTTTACACAGGCCAAGTCAATTTGCCCCTCAGATCCACTGGTTTATAATGAACTGGGAGTTGTAGCCTATCATATGCAAGAGTATAATAGAGCTGTGTTGTGGTTTGAGAAAACATTAGCCTTGGTACCAACATCTTTATCTGAAATGTGGGAACCGACCGTAGTCAATCTTGCTCATGCATACCGAAAGTTGAAGATGTACAAAGAAGCAATTTCATATTATGAGAAAGCACTTGCATTATCAACAAGAAGTGTGAGCACTTATGCTGGTCTTGCATATACATACCACTTACAGGATGATTTCACTACAGCTATTTCATATTATCACAAAGCCTTGTGGCTAAAACCAGATGATCAATTCTGCACTGAAATGTTAAGTTGGGCACTAATAGATGAAAGTCGAAGGGGTGTAGATCCTAGTCTTGATTCCGGTGAAGTTTAATTTGAATATGATGGTGCAACCTCATTTATCTTGTAATATATGTATGTGTAAACTGTTAGAAGTATTTCAATATATGGGTTTAAGCCCATTTCTTTGTAATAGTTTATTTGTACAGCACATATATAAGATTCTCCTTGGTTGTGTTTGACACAAACAAGGATTTATGTATATTCATCTCTTTCTACATGGTATCTAGAGTCTAGTGGATCCTTGCCCTCTCGG 2117 0.4261 MREEEIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTADPADIYMQAQALFLGRHYRRAFHLLNASKIVLADLRFRYLAAKCLEELKEWDQCLSMLGGAKVDDDGNVSDIKDANVMYLDKDCEDREINISSAICFLRGKAYEALENRAQARLWYKAAIKADPLCYEVWLLLNVFYKLIVSIGNTGICLTSITAITEETKVDRIVSRLVESHNLAALECLIENHMLTCEEEAKLISSLQFSSEDGWLSSFYSCLIKKYDKENVVEAKFRDLENESCKSDQSDCSFLRTLKSNTDLLACKAEYYHQCGEYQKCFELTNVLLDNDLFHLKSTLVHLAASVELGHSNELYLMSCNLVKDYPQMALSWFAVGCYYYCIKKYDQSRRYFSKATSLDGTFAPAWIGYGNAYAAQEEGDQAMSAYRTAARLFPGCHLPTLYIGMECMRTHSYKLAEQFFTQAKSICPSDPLVYNELGVVAYHMQEYNRAVLWFEKTLALVPTSLSEMWEPTVVNLAHAYRKLKMYKEAISYYEKALALSTRSVSTYAGLAYTYHLQDDFTTAISYYHKALWLKPDDQFCTEMLSWALIDESRRGVDPSLDSGEV 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04072 595 Pfam Tetratricopeptide repeat 132 161 IPR019734 GO:0005515
Pste1g04072 595 Pfam Tetratricopeptide repeat 367 425 - -
Pste1g04072 595 SUPERFAMILY TPR-like 39 176 IPR011990 GO:0005515
Pste1g04072 595 SUPERFAMILY HCP-like 361 568 - -
Pste1g04072 595 ProSiteProfiles TPR repeat profile. 500 533 IPR019734 GO:0005515
Pste1g04072 595 ProSiteProfiles TPR repeat profile. 461 494 IPR019734 GO:0005515
Pste1g04072 595 Pfam Tetratricopeptide repeat 504 561 - -
Pste1g04072 595 Pfam Anaphase-promoting complex, cyclosome, subunit 3 19 97 - -
Pste1g04072 595 Gene3D Tetratricopeptide repeat domain 1 179 IPR011990 GO:0005515
Pste1g04072 595 ProSiteProfiles TPR repeat profile. 534 567 IPR019734 GO:0005515
Pste1g04072 595 ProSiteProfiles TPR repeat profile. 393 426 IPR019734 GO:0005515
Pste1g04072 595 Gene3D Tetratricopeptide repeat domain 206 580 IPR011990 GO:0005515
Pste1g04072 595 ProSiteProfiles TPR repeat profile. 359 392 IPR019734 GO:0005515
Pste1g04072 595 SMART tpr_5 427 460 IPR019734 GO:0005515
Pste1g04072 595 SMART tpr_5 534 567 IPR019734 GO:0005515
Pste1g04072 595 SMART tpr_5 500 533 IPR019734 GO:0005515
Pste1g04072 595 SMART tpr_5 130 163 IPR019734 GO:0005515
Pste1g04072 595 SMART tpr_5 359 392 IPR019734 GO:0005515
Pste1g04072 595 SMART tpr_5 461 494 IPR019734 GO:0005515
Pste1g04072 595 SMART tpr_5 393 426 IPR019734 GO:0005515
Pste1g04072 595 PANTHER CELL DIVISION CYCLE 16,23,27 22 571 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04072 338 566 Glycosyltransferase AT3G04240 22.707 2.56e-10 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g04072 1 23200014 23210767 Pste1g04072 1 23200014 23210767 ECH