Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04037 CAGACACTCACTACTGGCCACTCTCACCATAAATTGTGACCATCCTCACGCTAACCCTTTGTTCCCTTTTCTCTCTTGTTTTTCACAAAAACTTGTGACTCTCAAAGCAAAAAAAGAAAAAAAACAGAGAGAACAATGATGAAGCCATCAATGCTCAGATCTCTCCACTCCGCCGCCGCTCGCGGCGCCTCCCACCTCTCTCGCCGCGGCTTCGCCTCCGAGCCGGTGCCGGAGCGCAAGGTGGCGGTTCTCGGCGCCGCCGGTGGGATCGGTCAGCCCCTCTCCCTTCTCATGAAGCTCAACCCCCTCGTTTCGAGCCTCTCCCTTTACGATATCGCCGGCACCCCCGGCGTCGCCGCCGATGTCAGCCACATCAACACCAGATCTGAGGTAGTGGGGTACCAAGGTGAGGCAGAGCTTGGAAAAGCTTTGGAGGGTGCAGATGTTGTTATCATTCCCGCTGGTGTTCCCAGAAAGCCTGGAATGACTCGTGATGATCTTTTTAATATCAATGCTGGCATTGTCAAGGCACTGTGTACTGCTATTGCTAAGTACTGCCCCCATGCACTTGTTAACATGATAAGCAATCCTGTGAACTCCACTGTTCCTATTGCTGCTGAAGTTTTCAAGAAGGCTGGGACATATGATGAGAAGAGATTGTTTGGTGTTACCACCCTTGATGTTGTTAGGGCAAAAACTTTCTATGCTGGGAAAGCCAATGGGTCAATGTACCTGTTGTGGGTGGCCATGCAGGCATTACTATTCTGCCCCTATTTTCTCAAGTACCTTCCTGCCACACCAAAAGCCAATCTTGATGATGATGTCATTAAGGCTCTTACAAAGAGGACACAAGATGGAGGAACGGAAGTTGTAGAAGCTAAGGCAGGAAAGGGTTCTGCAACTTTGTCAATGGCCTATGCTGGTGCCCTTTTTGCTGATGCTTGCCTCAAGGGTCTCAATGGGGTTCCAGATGTTGTTGAGTGCTCATTTGTGCAATCCACTGTCAGTGAACTTCCCTTCTTTGCTTCCAAGGTGAGGCTTGGGAAAAATGGTGTTGAGGAAGTTCTGGGCTTGGGATCTCTCTCGGATTTCGAGCAACAAGGCCTTGAAAGCCTTAAACCCGAACTCAAATCATCAATTGAGAAGGGAATCAAATTTGCCAACCAGTAATTGAACATGTTGTCACATACATGTGTGGTACGTTATTGAATATTCCTTTAAGAACCAAATCAAATTTTGCAATCCCAGGACCATTGTTGTATTGTTGCCGGCAGTGGTGGCGGCTTTTGTTCTGTTTAGAGTTAGGTATACGCCATGGTTTAATAATGAAGTCTGCGAGCAGTTTGTTGCACAAGGGATTGATCCATCTTAAAACTAAGTTTAGGTTTGGCCATTCCATTAATAATGGTCCCTTTTTAACTGTATGGTTTCACATAATGTAATTGCAGGGTGTTGTGCCCCCATTTTCTTATTTGATTTTTTTCTCTAATGATCTTTTGAAGTTTTTGCAAGCTTACTACAGCAGAGACAAATGTGCTGAGTTAGGAGGGACCTGTACTATTGTTGAATTTGTCTTGTTTTTTGCCATGGTTTCGAGTGGTGGTACTGCTAGAACATATTTATTATTGGTTATC 1634 0.4602 MMKPSMLRSLHSAAARGASHLSRRGFASEPVPERKVAVLGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTPGVAADVSHINTRSEVVGYQGEAELGKALEGADVVIIPAGVPRKPGMTRDDLFNINAGIVKALCTAIAKYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTTLDVVRAKTFYAGKANGSMYLLWVAMQALLFCPYFLKYLPATPKANLDDDVIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVPDVVECSFVQSTVSELPFFASKVRLGKNGVEEVLGLGSLSDFEQQGLESLKPELKSSIEKGIKFANQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04037 344 FunFam Malate dehydrogenase 179 344 - -
Pste1g04037 344 ProSitePatterns Malate dehydrogenase active site signature. 178 190 IPR001252 GO:0006108|GO:0016615
Pste1g04037 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 177 IPR036291 -
Pste1g04037 344 NCBIfam malate dehydrogenase 35 343 IPR010097 GO:0006099|GO:0030060
Pste1g04037 344 Gene3D - 179 343 IPR015955 GO:0003824|GO:0016616
Pste1g04037 344 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 221 341 IPR022383 GO:0016616
Pste1g04037 344 Pfam lactate/malate dehydrogenase, NAD binding domain 35 177 IPR001236 GO:0016491
Pste1g04037 344 Gene3D - 33 178 - -
Pste1g04037 344 PANTHER MALATE AND LACTATE DEHYDROGENASE 13 344 - -
Pste1g04037 344 PIRSF Lac_mal_DH 30 343 IPR001557 GO:0016616|GO:0019752
Pste1g04037 344 FunFam Malate dehydrogenase 32 178 - -
Pste1g04037 344 CDD MDH_glyoxysomal_mitochondrial 35 342 IPR010097 GO:0006099|GO:0030060
Pste1g04037 344 SUPERFAMILY LDH C-terminal domain-like 178 343 IPR015955 GO:0003824|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04037 Pste-Chr1 22664197 22668730 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g04037 1 22664197 22668730 Pste1g04037 1 22664197 22668730 ECH