Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03934 TTTTTTCCCTGCGACCACATCCCCTCTGTTTCCCACTACCCATCTGCTTCTTCCTTCTCCTACGGCGAGATTCGCATCCGGCGAGTTTTAACGTTGAATTACTAAAATGATGTAAAAGTGTGACGCAGGTTTGTCCAGAAATAAATGTTTTTTGAGTTTATGCTGATTATTTTTGGTGAATACTGCATACCCATATGGTCGAATCTAGCGTAGTTTGCATGTGATTGTGAGAAGAGTTGAATATAAGGGGAGGGACGTTATTGGGTTGTGGTTTGTGGTGTTTTGTGGGTATCCCAGATAGGATTAATGGAAACCCCGTCTTCGAATGGATCGGTTTTAAAGCGTTCATTGAGGAGAAAGGTGAATTTCAGGAACTATGATGAGGATCTGATGGATGACTTGTTTGAGAAGCAGTTGGGGGGTGGTTTGAAGAAGAGGAGTAGGACCAAAGAGGATTTGGAGAAGGAGACTGAGACCGAGGCTATGATTGCGATTTCGCTTGGTTTTCCCATTGATGCTTTGCTTGAGGAGGAGATTAAAGCTGGGGTTGTGAGGCAGTTGGGTGGGAAGGAGCAGAATGATTATATAGTCATCAGGAATCATATATTGGCTCTTTGGAGGAGGGGGAATGTGAGGTTGTGGTTGAGTAAAGGGATGATTAAAGAAACTGTGAGCAATGAGTATGAGCATTTGATTAATTCTGCTTATGACTTCCTTTTGTATAATGGTTACATAAATTTCGGGGTTTCGCCGGCATTTACCTCTCAGTTGCCTGAGTCCACTGAGGGGAGTGTGGTTGTTATTGGTGCTGGCCTTGCCGGGCTGGCAGCGGCGAGGCAGCTCTTGTCATTCGGTTACAAGGTTGTGGTTTTGGAAGGAAGGACCAGGCCTGGTGGTCGAGTTTATACTCAGAAGGTGGGGTGTGAGGGTAAATTTGCTGCCATTGATTTGGGTGGGAGTATTATCACTGGCATTCATGCTAACCCTTTAGGGGTTCTTGCTCGACAGCTTTCTATACCACTTCATAAAGTCAGAGATGATTGCCCTTTATATAAGCCAAATGGGGCACCGGTTGATAAGGAAATAGATGCAAGTGTTGAATTCGTATTTAATAAGTTGCTTGATAAGGTTATGGAGTTGAGGCAAATTATGGGTGGGTTTGCAAGTGATACCTCGCTTGGTTCAGTCTTGGAGACGCTCAGGCGGATGTATAACGTGACCCGAAGTACAGATGAGAAGCAGTTACTTGATTGGCATCTTGCCAATTTGGAATATGCAAATGCTGGGTGCCTTTCAAATCTTTCGGCTGCCTATTGGGATCAGGATGATCCTTATGAAATGAGTGGTGATCATTGCTTTCTTGCTGGGGGAAATATAAGGTTCATAAAAGCTTTATGTGAAGGTGTTCCTATTTTTTATGGAAAGACGGTTGATACTATCAGATATGGAAATGAGGGTGTTGAGGTTATTGCTGGAGACCAAGTCTTTCAAGCAGATATTGCCTTATGCACGGTGCCTCTCGGAGTTCTGAAAAAGAAGGCAATCTGTTTTGAACCTGAATTACCTGAAAGGAAACTGGCAGCAATTGAGAGGATGGGGTTTGGGCTGCTGAATAAAGTTGCCATGGTTTTTCCTTATGTGTTTTGGGGGGAGGATCGAGACACATTTGGATGTCTCAATGAACATAGTCATCAACGTGGCGAATTTTTCCTATTTTACTGTTACCATACGGTTTCTGGAGGTCCAGCAGTTGTTGCGCTGGTGGCTGGTGAAGCCGCACAAGTCTTTGAATCCACTGATCCTTCCATTTTGCTCCATCGGGTTTTGACTGTTTTAAAAGGAATATTTCATCCTAAAGGCATCATTGTGCCGGATCCATTACAGTCAATTTGTACAAGATGGGGCAGTGATCCCCTTGCTTATGGTTCCTACTCTCATGTTAGTGTGCAATCTTCTGGTGCTGATTATGATACGCTTGCAGAAAATGTGGGGAACCGCCTGTTCTTTGCTGGTGAGGCCACAAGTAGGCAATATCCAGCTACTATGCATGGCGCCTTTTTGAGTGGCTTGAGGGAGGCTTCACGCATTCACCGATCAATCCGGGCCCAAAACATTCCTAGGAAGTATATGCCTAAGAATATTGGACTTAACAATGATGTCCTGGCTGATTTATTCAAGAGGCCTGATTTGGAATGTGGAAAATTTGCTTTCATTTTTTATCCTGTGTCGGAAATGCAGTCACTTGGCCTTCTGCAAGTCACTTTTGGCAATGCAGAAGAAACTTACGAGGAGCTGTTAAACAGCTATCCAAATCCTACAAAGTGGCCTTTGCAGCTGTACGCAGTAATATCCCGCGAACAAGCCCAGCAGCTACAACAAGTTGAGGGAGGGGATCAAAGGAGGTTATCATTTTTGGTAAAATCCCTTGGCTTAAAGCTTATGGGACCAAATGCTTTGTTTACTGCAGGTAACACATTAATAACTAGCATTGGTCATTTGCGAAAAGGCCGGTGGAGGAACCGCTTAATTACTTGTTAACACCATATCTTAAAAGAGACACAATTTGTGCATCTTTTCTTATTGAAACCTTGTGCTATAGACACACCCTTACAAAAGAATTGCTTTGAATGAACGTGCCTTTTCTTTTCTGCTTCTGGGGTGAAAAGTCTGTATATAATATAGACTTTGGTAGATCATTGATTTGCTGCAAGAGATAGAAGATTTTTGAAGGCTTGACTAGTGAGATGGTTCAATTTGTGAAGGAAGTCTTGTATCTCATTTTTAGATGTTTCTGTTTAGCTGATGATGCAGTCATAGATCAGTTATGTAACCACAGGAAGATTAGTTGAAATTTGAAGACATATATTGGTAGTCCAAGAGGGGTGAAGAATTAGTATACAAAGGGGGCACTGCCCCCAATTGTTTGTATCATGTACAACAGATGTAGAAGTACTTACCAATACCCCCACCCCAGCAGGACATTAACCTTTTTCTCCTTTTTTTTTTTCTAGAGAGCCTGTGTGCCTCACATGTACTTGTATCATAATTTTTTCTTTAATTCCTTCATTGGTTCTATAGAAGACTTGCATGTTCAGATAA 3099 0.4259 METPSSNGSVLKRSLRRKVNFRNYDEDLMDDLFEKQLGGGLKKRSRTKEDLEKETETEAMIAISLGFPIDALLEEEIKAGVVRQLGGKEQNDYIVIRNHILALWRRGNVRLWLSKGMIKETVSNEYEHLINSAYDFLLYNGYINFGVSPAFTSQLPESTEGSVVVIGAGLAGLAAARQLLSFGYKVVVLEGRTRPGGRVYTQKVGCEGKFAAIDLGGSIITGIHANPLGVLARQLSIPLHKVRDDCPLYKPNGAPVDKEIDASVEFVFNKLLDKVMELRQIMGGFASDTSLGSVLETLRRMYNVTRSTDEKQLLDWHLANLEYANAGCLSNLSAAYWDQDDPYEMSGDHCFLAGGNIRFIKALCEGVPIFYGKTVDTIRYGNEGVEVIAGDQVFQADIALCTVPLGVLKKKAICFEPELPERKLAAIERMGFGLLNKVAMVFPYVFWGEDRDTFGCLNEHSHQRGEFFLFYCYHTVSGGPAVVALVAGEAAQVFESTDPSILLHRVLTVLKGIFHPKGIIVPDPLQSICTRWGSDPLAYGSYSHVSVQSSGADYDTLAENVGNRLFFAGEATSRQYPATMHGAFLSGLREASRIHRSIRAQNIPRKYMPKNIGLNNDVLADLFKRPDLECGKFAFIFYPVSEMQSLGLLQVTFGNAEETYEELLNSYPNPTKWPLQLYAVISREQAQQLQQVEGGDQRRLSFLVKSLGLKLMGPNALFTAGNTLITSIGHLRKGRWRNRLITC 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03934 743 Gene3D - 163 593 IPR036188 -
Pste1g03934 743 FunFam Lysine-specific histone demethylase 1A 57 158 - -
Pste1g03934 743 Pfam SWIRM domain 72 145 IPR007526 GO:0005515
Pste1g03934 743 PANTHER FLAVIN MONOAMINE OXIDASE 162 598 - -
Pste1g03934 743 Pfam Flavin containing amine oxidoreductase 170 594 IPR002937 GO:0016491
Pste1g03934 743 SUPERFAMILY FAD-linked reductases, C-terminal domain 431 544 - -
Pste1g03934 743 ProSiteProfiles SWIRM domain profile. 52 154 IPR007526 GO:0005515
Pste1g03934 743 Gene3D - 57 156 IPR036388 -
Pste1g03934 743 Gene3D - 245 550 - -
Pste1g03934 743 SUPERFAMILY FAD/NAD(P)-binding domain 160 597 IPR036188 -
Pste1g03934 743 SUPERFAMILY Homeodomain-like 54 157 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03934 Pste-Chr1 20315004 20321155 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Pste1g03934 Amino_oxidase 5.5e-86 CL0063