Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03608 ATGAGGCTATGGATTAAGGCCTCGGGTGCATTGAAAGATACGTATAGCATTTGGGTGGCAAAGTTGGCACCAAGTGGACCTTGTAGGAACCCTGATCTTGAAACCGTGATCATCAAGGCCACTAGCCATGATGAACAATGCATGGACTACAAGAACGTTCAAAGGGTTTTCAAATGGCTACGCACCTCACCTTTGTACCTTAAACCTCTTCTCTACACACTTTCCATTAGAATGGAGAAGACTCGTTCCTGGGTTGTGGCACTCAAAGGGTTAATGCTCATTCATGGAGTGTTTTGTTTTGACCTTCCCGCGGTACAAAAATTGGGAAGGTTACCCTTTGATTTGTCTCACTTTAGCGATGGACATGTAAACCCTAATAAGGCATGGGTTTTCAATGCCTTTGTTCGTTCCTATTTTGCTTACTTGGACCAAAAATCAGCGTTTGTGAGGTTAGAGGCCACCAGAGAGACCAAGCATGGGAGCAAGGAGTTGAAGGAAGAGACTGTTATGGAAGAGTTGAAAAACGTGGAGAAGCTGCTTGGTTTGATTGATTTGCTTATTCGAATCAAGCCTAGGAACCCTAGCATGAACGTCGTGCTTGTTCTTGAGGCCATGGATTGTGTCATGGACGAGGTCTTGGACATGTACGCCAAGTTTTGTGTTAGGGTTCATCATGTAGTGTCAAGGATAATCGATTTTGGTGGAAAAGATGAAGCAGGGGTTGGTCTTGATGTTTTGAGAAAAGCTGAATTGCAAGGTGACAAAGACATTGATGAACTTGTAAGAATAAGGGATGGTTGTGTCTCCGAGAAGAAAAATATGAAGGGTGATACTAATAATAATAATAACGATGATGTTGTGGCATATGAGTTTAATAATTGTAGAGCTATTGTCACCAGTTCGGAGAAGCAATTAGATTTGAAGACTGTGATCACTGACCAATGGGAGGTATTTGATGATGATCTTATGGATAGTGCCTCCAATGCTACAAACTTCCCGATCTTCACAACTAGTAACCCTTTTCTGGATTCTTTGAGCATCGTACCTTATATTCCCGTTTGCAACAATCCTGTTCTTCCAGATTTAATTATTTTGTAG 1098 0.4189 MRLWIKASGALKDTYSIWVAKLAPSGPCRNPDLETVIIKATSHDEQCMDYKNVQRVFKWLRTSPLYLKPLLYTLSIRMEKTRSWVVALKGLMLIHGVFCFDLPAVQKLGRLPFDLSHFSDGHVNPNKAWVFNAFVRSYFAYLDQKSAFVRLEATRETKHGSKELKEETVMEELKNVEKLLGLIDLLIRIKPRNPSMNVVLVLEAMDCVMDEVLDMYAKFCVRVHHVVSRIIDFGGKDEAGVGLDVLRKAELQGDKDIDELVRIRDGCVSEKKNMKGDTNNNNNDDVVAYEFNNCRAIVTSSEKQLDLKTVITDQWEVFDDDLMDSASNATNFPIFTTSNPFLDSLSIVPYIPVCNNPVLPDLIIL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03608 365 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Pste1g03608 365 CDD ANTH_N_AP180_plant 33 148 - -
Pste1g03608 365 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 254 IPR045192 GO:0048268|GO:0072583
Pste1g03608 365 SUPERFAMILY ENTH/VHS domain 32 151 IPR008942 -
Pste1g03608 365 SUPERFAMILY GAT-like domain 164 252 - -
Pste1g03608 365 Pfam ANTH domain 32 254 IPR011417 GO:0005543
Pste1g03608 365 FunFam Putative clathrin assembly protein 7 153 - -
Pste1g03608 365 Gene3D ANTH domain 155 290 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pste1g03608 365 Gene3D - 5 154 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03608 Pste-Chr1 17146448 17147628 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03608 1 17146448 17147628 Pste1g03608 1 17146448 17147628 ECH