LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste1g03556	CAGCAACTCTTTTTTCTCTTCTACTCAACAATATTATATCACACACTTCATTTCATTCTCAGATCTCCCAAATTCCCTCACATCGGCTCCCTCTGTACAGACACCTCGCAATCATCCTACCCAAGTCTTCTTCCTCAACAATTTTTCACCTTTCAGCTTCAAAACCCCTCAATTTTGCATTTCATATTGCGGGATCCACCTGAATTGCATTGGATTAGAATCCCACTAAAAAAATCACTTTTTTTCAACTGGGTATGCTCTGTGTGTGGAATTAGTGTAGTGTATTATAAGTAGTGAGTTCTCATGGCAATGCCATCGGGAAACACGGTTATGCCGGAAAAATTGCAGTGTCCGGGTGGTGGTGGTGGTGGCGGTGGCGGTAGTGAGATCCATTACCGGCAGCAGTGGTTTGTGGATGAAAGGGATGGGTTTATCAGTTGGCTTCGCAGTGAATTCGCGGCTGCGAATGCCATGATTGACTCTCTGTGTCACCATTTGCGTGGTGTGGGGGAGCCTGGGGAGTATGACATGGTTGTTGGGGCAATTCAGCAGAGGAGGTGTAATTGGACTCAGGTGCTGCTTATGCAGCAGTATTTTTCTGTGTCTGAAGTGGTGTATGCACTGCAGCAAGTGACCTGGAGAAGGCAGCAGAGGTTTGTGGAACCAGCCAAGCCCGGTGCCAAGGAGTTTAGAAAGTATGGTTCCGGGTTTAGGCATGGCCACAGATATGAGGTTGCCAAGGAAGGTTATAATTCTAGTGTAGAGTCTTTTGGTCATGGGGTAAATGCTGGAGAGAAAGGGACTCGTATTACTGACAAGAATGGAGAAATTAATTTTGGTGCCAAGGTTGGGACCATGGACAACAAGAGTTTAGCATCTCCTGACGAGAGGAAAGATAGTTATCCAAATCATCAATCTGATAGCAATTTGAAGAGCTCTGGGAATTCTCAAGGATCTCTGTCCAGCTCAGAAAGTGAAGCTGTGGGTGTGAATGAAGAATGTATATCAAATTCTAAAGGGAATGATTCGTACCCTATGCAAAATCACCGTCAGAGTCAGAATGCTTCTTCAATGGGAAAAACTTTTATTGTCAATGAGATGTTTGATGGGAAGATGGTGAATGTGGTTGATGGACTGAAGTTGTATGAAGATTTATTGGATAGTACTGAAGTTTCAAAACTTGTTTCATTGGTCAATGATCTTAGGATTGCTGGAAAAAAAGGACAATTTCAAGGGAGTCAAACATTTGTGGTTTCAAAAAGGCCCATGAAAGGACATGGAAGGGAAATGATTCAATTGGGTGTTCCCATTGCCGACGCACCTCCATACGTCGACAATGTGTCAGGAATCTCCAAAGGCATCCCTGTAGTACTAGTAATGATTGATGAAGTTCATCAATTGAATCTGACAGATAAGAAAGTAGAATCTATACCTTCGTTGTTCCAAGATATTATTGAGCGCTTCATTGCCTCTCAAGCGATGACTGTGAAGCCTGATGCTTGCATTGTGGATTTCTATGATGAGGGTGATCACTCGCAGCCCTACAGTTGGCCAGTTTGGTTCGGAAGGCCTGTTTATATGCTTTTCCTAACTGAATGTGATATGACTTTTGGGAGAATAATCGTCTCGGACCATCCCGGAGATTACAAGGGTGCTATCAAGCTTTCACTTTTACCTGGATCGCTTCTGGTGATGCACGGGAAATCAACTGATATTGCCAAACATGCTCTTCCTTCTATCCACAAACAACGCATACTTGTGAGCTTCACAAAGTCCCAACCGAGTTCTTTGTCAAATGATTCTCAACGTCATGCTCCACCAGCAGCATCTCATTGGGCCCCACCACTGAGTAGATCTCCCAATCACATGCGTCATCAATCAGGCCCCAAGCATTATCCCACTGTTCCAGCAACTGGAGTACTGCCTGCTCCATCCATATATGCACCTCCGAAAGGTATGCAGCCATTGTTTCTGCCAGCGCCCGTTGCGCCTCCCATGTCATTTCCTACACCTGTGCCAATCCCACCTGGTTCTACCGGATGGACCTCAGCTCCTCCTAGGCATCCTCCTCCTCGAATTCCTGTTCCCGGCACAGGAGTCTTCCTCCCCCCACCTGGCTCAGGCACGCCGCAGCACTTAACAGGTACTGTGCCTGAAGTGAACCCAACTGTGAAAATTTCAACTATGTCAGAAAAGGAGGATGGGAAATCTAACCATAACAACACCAAATCTTCACCAAAAGGCAAAACGGATGGAAAGATGCAAGGAGAAGAAACCAATGGAAATGCAAATGGAACTGAGTCTGAACAAGCTGTAGTAGAAAAAGAACATGAAAACAATGACACGACTGTTGCAAACCATTAAGCTGTCGCTGATTATAGAGAGAGGGAGAGAAAAAGAAAGCTTATCAAAGGAAAGGGGTAGGCTAATGACGTTACGAGTTTAAATCAAATGTAAAGAGCAGCAACATTTGACACGACATGATACAATACTGCAAAGGTGAGAACAAGGGAAGGTGGCAGAACTTTTTAGTTCACTTCTTAATCCTTTGGTTTGCTCCATTCTTTTTGGTTGCCTTATTATATTAACTTTTACAGCAAGGGAAACCCCATTCTTAATTCTTGATTCAGATTTTGATTTTTCCTTTGAATTATTTACGACTTCTGCTGTTGATT	2675	0.4404	MAMPSGNTVMPEKLQCPGGGGGGGGGSEIHYRQQWFVDERDGFISWLRSEFAAANAMIDSLCHHLRGVGEPGEYDMVVGAIQQRRCNWTQVLLMQQYFSVSEVVYALQQVTWRRQQRFVEPAKPGAKEFRKYGSGFRHGHRYEVAKEGYNSSVESFGHGVNAGEKGTRITDKNGEINFGAKVGTMDNKSLASPDERKDSYPNHQSDSNLKSSGNSQGSLSSSESEAVGVNEECISNSKGNDSYPMQNHRQSQNASSMGKTFIVNEMFDGKMVNVVDGLKLYEDLLDSTEVSKLVSLVNDLRIAGKKGQFQGSQTFVVSKRPMKGHGREMIQLGVPIADAPPYVDNVSGISKGIPVVLVMIDEVHQLNLTDKKVESIPSLFQDIIERFIASQAMTVKPDACIVDFYDEGDHSQPYSWPVWFGRPVYMLFLTECDMTFGRIIVSDHPGDYKGAIKLSLLPGSLLVMHGKSTDIAKHALPSIHKQRILVSFTKSQPSSLSNDSQRHAPPAASHWAPPLSRSPNHMRHQSGPKHYPTVPATGVLPAPSIYAPPKGMQPLFLPAPVAPPMSFPTPVPIPPGSTGWTSAPPRHPPPRIPVPGTGVFLPPPGSGTPQHLTGTVPEVNPTVKISTMSEKEDGKSNHNNTKSSPKGKTDGKMQGEETNGNANGTESEQAVVEKEHENNDTTVANH	686

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste1g03556	686	MobiDBLite	consensus disorder prediction	490	504	-	-
	Pste1g03556	686	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED	34	645	IPR044842	GO:0003729\|GO:0006402\|GO:0032451
	Pste1g03556	686	MobiDBLite	consensus disorder prediction	490	531	-	-
	Pste1g03556	686	MobiDBLite	consensus disorder prediction	628	686	-	-
	Pste1g03556	686	Gene3D	-	262	497	IPR037151	-
	Pste1g03556	686	MobiDBLite	consensus disorder prediction	160	256	-	-
	Pste1g03556	686	MobiDBLite	consensus disorder prediction	204	256	-	-
	Pste1g03556	686	MobiDBLite	consensus disorder prediction	669	686	-	-
	Pste1g03556	686	MobiDBLite	consensus disorder prediction	1	25	-	-
	Pste1g03556	686	SUPERFAMILY	Clavaminate synthase-like	267	488	-	-
	Pste1g03556	686	MobiDBLite	consensus disorder prediction	640	668	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste1g03556	Pste-Chr1	16841584	16847414	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste1g03556	1	16841584	16847414	Pste1g03556	1	16841584	16847414	ECH