Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03528 GTTGAGTTTATCTGTCTAGTGTTATATATCTAGGAATCAAAACCCAAACTCAGAACTAAAAAAGCACGCACCCGCGATTCTCGCTTGTTTTTTTGGAACTATACCTGTTTGTTTTTAGAACACAGATTTGGTTTTGGTCTTTGTGTTCTGTCTCTCTCCTTCTCCTTTGTGTCTTTGCCTTTGCTATCCCTTTTCTTTGTCTTTATTTCTTTGTTTGGTGCTCCATCAGCCATGATTGAAGGCAAAGATCTTGTTCCCAATAACGTTGACTCCGAAGGTGAGAACTCAAGGAGCAAGGTGCAACATCAGCATCGTGATTTTGCTCATGGCAAGGAACACCCACAAGAGAATAAACAAAGTTACCCAGAGAAGAAGGTTGGTGCTGACGAGTTTCAGCCGACACCCTCAAAAGTTGGGACTTCTGGGTTGCAAGAGTTGACCCTCAGCTATCTCTGTGACAACCCAAAATTGAGTCTTGTTGAGAGAGAGGTTGGTGGTAGAAGCTTGGTGAAGGGCAAAGAAGTTGTGGTTTATGGGAATTCAGATCAAGATGAGATAGCAGAAGGGGTTGGTCTCTCACAACGTGATGAATTAAGGTTTAAATCATCGTTGGCAGAGGTGTCCACATTTAGTGCGCAACAGTATTTTGGTGGAAATGGAAACCAAAAACAAGATCAAGATGAGAAATGGGTGGAGAGGGATTTTTTGAGTTTGAGTGAGAGTAGGGAGAATTCTTCAAAGAGATCCATCGAGGAAGACTGTGAGAGGGAGAAGAATTGTGGCAACAAGAAGCAGAAGCTTGAGACTCTTAGTCTATCTCTTGCTTTGCCTGATGTCTCGCTCTCTCTCACAGCCTCAAACGCTTTGCAAAATGGTGACCAACTTGTTAGGCCAAAGGCTAGTAAGCCATCCGCAAGGACCACAACTACGATCAATTCGTGTTCCAATGATCACACAGCAGCAGCTTCTATGTCTCACTCTTACTCCCACCCTTTCTCACACAACCCAAGCTGCTCACTTACCCGTAATTCAACTGAGAATTTTGAGTATTCATTCAGCAAAGATGATCACATTTGGCATTGTGGGGAGGGGACTAATGGATCGGTTCATAGCAGGTTCAAGCCTGTAGGAGATGGTGTTGCTTTGGTCAATCATTCCTTTATGCAAGGGAATAGTCAGTATAAGGCTACTAGCTCAGATAACCAATCTTTTTACCCTTCAGAATTGCCTGCTAGAGTGAAATTTGAAGCTCAGTCAGAGGGCTCAAAGGGTAAGAATTCTGAGAATCTGAGAGGCTTGGATGGTAGGAAGATGAAGTTTTCTACATCAGAGAGAGTTCTTAGAGAAATTGTGTCTGAGTCTATCCCAGACATGGCATTGACATTTCAGGAGTTCACTGATGAAGTCATAACTTCAATTAAGGAACACTTGAAAGGTCTCATTGAAATGCCAGAGAAGAAAGGGGAATTAGTGAACCTCCAGAACCGGCTCGACCGAAGATCAGATCTCACCAGAGAGACTCTTTCAAAGTGTCACAAGGAGCAGCTAGAGATTTTGGCTGCTATCAAGATGGGGCTTGGGAGTTTCTTGTCTGGTAAGTTCCAATTCTTGGAGATGGTGGAGGTTTTCTTGTATATGAGATGTAGAAATGTTAACTGCAAGAGCTTACTGCCTGTTGATGATTGTGACTGCAAGATGTGCTCAGGAAATAAGGGGTTTTGTAGTTCTTGCATGTGTCCTGTTTGTATGAACTTTGATTGTGCTAGTAACACTTGCAGTTGGGTTGGTTGTGATGTTTGTTCCCATTGGTGTCATGCTTCCTGTGCCATTCATAAGAATTTAATCAAACCTGGGCCTAGTTTGAAGGGTCCTTCTGGGACCTCTGAGGTGCAGTTTCATTGTATTGGCTGTGGACACGCTTCAGAAATGTTTGGCTTTGTTAAGGATGTCTTTGTGTGTTGTGCCAAGGATTGGGGCCTAGAAACCTTGATGAAAGAGCTTGACTGTGTGAGGAGGATTTTCCAAAGAAGTGAAGATCGTAAAGGGAAGGAATTGCATATTAAGACAGATGATTTGCTGTTAAAGCTTCAAGCTAAGCTGGTTTCTCCTTTGGATGCTTGCAGCTACATTATGCAAATTTTCAGCTATGCAGATGGCATGGCAGACTTTCCTGCTCCTGCTATACCCTCAAAAGATTTGTCAACATCTAAGGCTAACCTTAGAATGGACACAACATCATGTCTTCCAAAATCTACTTCTCTTGTACCAAAATATACTTATGACATGAGCTACACAAGGTCAAATGATCTTCAACAGAAAGAGCTCAAATCCTCCCTCTTAAGTGAACATAAAAATGAGACCGATTTCCATTTGGAGGCTTTGTTAAGGAAAGGAGAAGGGCTTGAAAGCTTGGAAAGCATCGTGCGAATCAAAGAGGCCGAAGCCAGAATGTTCCAGAACAAGGCAGATGAGGCAAGGAGAGAGGCAGAAGGGTTCCAGAAGATGATTAAAACAAAGGCTGCACAGATGGAAGAAGAGTATGCTGATAAAATTGGCAAGCTTTGCTTGCATGAGGCAGAGGAAAGAAGGAAGAAAAAATTTGAGGAACTCAATGCCTTGCAAAATTCCAACTACGATTACTTCAACATGAAAAGCAAAATGCAAGATGAGATTCATGGTTTGTTGAAGAGAATGGAGGCAACAAAGCAGCAATGGGTTTAATATATTATTATTCTTGTTTGATAATTTTCTCTCTAAAAGAACACTAGTAAGCTGTGTGTAATTTATTGATCTAGTAGTGCCCATTTCTATTCTGCTGTTTCTTCTTCAGCATAGATAACTTTCTGTTCTGATAAATTGAAGAATCAAGTTTTGTATCATGCATAATTTTATTTTTTTACAAAAATTGAGAGAGGCTTAAACATTTGTTTAGCCTTAGTCTTCATGAGCGCATATGCAGTTCATAATTATATTATATTATTATGTAAGACAAGAAAAACTAGTGAAAAA 3009 0.4108 MIEGKDLVPNNVDSEGENSRSKVQHQHRDFAHGKEHPQENKQSYPEKKVGADEFQPTPSKVGTSGLQELTLSYLCDNPKLSLVEREVGGRSLVKGKEVVVYGNSDQDEIAEGVGLSQRDELRFKSSLAEVSTFSAQQYFGGNGNQKQDQDEKWVERDFLSLSESRENSSKRSIEEDCEREKNCGNKKQKLETLSLSLALPDVSLSLTASNALQNGDQLVRPKASKPSARTTTTINSCSNDHTAAASMSHSYSHPFSHNPSCSLTRNSTENFEYSFSKDDHIWHCGEGTNGSVHSRFKPVGDGVALVNHSFMQGNSQYKATSSDNQSFYPSELPARVKFEAQSEGSKGKNSENLRGLDGRKMKFSTSERVLREIVSESIPDMALTFQEFTDEVITSIKEHLKGLIEMPEKKGELVNLQNRLDRRSDLTRETLSKCHKEQLEILAAIKMGLGSFLSGKFQFLEMVEVFLYMRCRNVNCKSLLPVDDCDCKMCSGNKGFCSSCMCPVCMNFDCASNTCSWVGCDVCSHWCHASCAIHKNLIKPGPSLKGPSGTSEVQFHCIGCGHASEMFGFVKDVFVCCAKDWGLETLMKELDCVRRIFQRSEDRKGKELHIKTDDLLLKLQAKLVSPLDACSYIMQIFSYADGMADFPAPAIPSKDLSTSKANLRMDTTSCLPKSTSLVPKYTYDMSYTRSNDLQQKELKSSLLSEHKNETDFHLEALLRKGEGLESLESIVRIKEAEARMFQNKADEARREAEGFQKMIKTKAAQMEEEYADKIGKLCLHEAEERRKKKFEELNALQNSNYDYFNMKSKMQDEIHGLLKRMEATKQQWV 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03528 829 Coils Coil 807 827 - -
Pste1g03528 829 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 53 828 IPR004082 -
Pste1g03528 829 MobiDBLite consensus disorder prediction 339 358 - -
Pste1g03528 829 MobiDBLite consensus disorder prediction 1 63 - -
Pste1g03528 829 Coils Coil 724 758 - -
Pste1g03528 829 Coils Coil 779 799 - -
Pste1g03528 829 MobiDBLite consensus disorder prediction 18 48 - -
Pste1g03528 829 CDD PHD_OBE1_like 501 560 IPR047578 -
Pste1g03528 829 Pfam Coiled-coil region of Oberon 690 818 IPR032535 -
Pste1g03528 829 Pfam PHD - plant homeodomain finger protein 471 595 IPR032881 -
Pste1g03528 829 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 384 406 IPR004082 -
Pste1g03528 829 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 764 786 IPR004082 -
Pste1g03528 829 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 725 745 IPR004082 -
Pste1g03528 829 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 423 438 IPR004082 -
Pste1g03528 829 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 462 483 IPR004082 -
Pste1g03528 829 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 508 528 IPR004082 -
Pste1g03528 829 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 581 600 IPR004082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03528 Pste-Chr1 16634976 16639010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03528 471 568 PHD Gene Family AT5G57380 27.551 4.03e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03528 1 16634976 16639010 Pste1g03528 1 16634976 16639010 ECH