Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03509 ATGGGTCTTAGTTTGAAGATGCAGAGCCACCATCCTGTGGCTTTGAGGTTGCATGATCAAATGGGGTCTAAAAGAAAGTACACTTTCATTCAGGCTCATAGAGCCTGGCTTCCGAAGTTTTTGCTGCTGTGGATCCTCCTTATGGCTTTGATCAGTTGGTGCATCTATAGCAAAATGGACGATGACACTAAAGTCAGAAGGAAAGAGGTGTTGGGTAGCCTATGTGATCTAAGGGCAAGAATGTTGCAAGATCAGTTTAGTGTTAGTGTTAACCATGTCCATGCCCTTGCCATCCTTGTTTCCACCTTCCATTACTACAGATACCCTTCTGCCATTGATCAGGAAACCTTTGCTGAGTATACAGCCAGGACTGCATTTGAACGACCGTTGCTGAGTGGTGTGGCATATGCACAAAGAGTTGTTAACTCTGAGAGAGAGAAATTTGAAAAAGAACATGGATGGGTTATAAAGACAATGGAAAGGAAGTCTTCATTGGTTAGAGATGAGTATGCACCAGTGATATTCGCCCAAGAAACTGTCTCATATCTCGAGTCTCTTGATATGATGTCTGGAGAGGAGGATCGAGAAAACATTCTAAGGGCTAGAGCCACGGGGAAAGCAGTACTGACTAGCCCTTTCAGGCTGTTGGGTTCTCACCATCTTGGTGTGGTTTTAACCTTCCCTGTGTACAAATCTAAGCTCCCCCAGAAGCCTACAGTGGAGGAACGCATTAAAGCGACAGCGGGATATGTTGGAGGATCGTTTGATGTTGAGTCTCTTGTAGAGAATTTACTTGGGCAACTGGCTGGTAACCAAGCAATTTTGGTGAATGTATATGACATAACAAACTATACTAATCCCCTAATCATGTATGGCAACCAACCTGAAGAAGGTGATAGGTCTCTTGCCCATGAAAGCAAGCTTGATTTTGGAGATCCATACAGGAAACATCAAATGATATGTAGGTACCATCAAAAGGCACCAACAAATTGGATAGCTCTTACCACGGCATTCCTATTCTTTGTGATTCTTCTATTAGTGGGTTACATTTTATACGGTGCTGGAAATCATATTGTCAAAGTCGAAGATGATTTCCATAAAATGGAGGAACTAAAAGTTCGAGCAGAAGCAGCCGATGTTGCCAAGTCCCAGTTTTTAGCTACAGTCTCTCATGAAATTAGAACACCCATGAATGGTATTTTAGGAATGCTTGCTTTGCTTCTAGATACAGAATTGAGTTCTACCCAACGAGATTATGCTCAGACTGCTCAAGCATGTGGAAAGGCACTGATAACATTAATAAATGAGGTGCTGGACCGTGCTAAAATTGAAGCTGGCAAGTTAGAGCTGGAGGCTGTTCCATTTGATCTTCGTTCCATAATTGATGATGTCCTTTCTCTTTTTTCTGAGAAATCTAGACACAAAGGTTTAGAGTTGGCCGTGTTTGTTTCTGATAAAGTTCCAGATATTATCATGGGAGATCCTGGGAGATTCAGACAAATAATAACAAATCTTGTTGGCAACTCTGTTAAATTTACTGAACAAGGACATATATTTGTTAAAGTCCATCTGGCAGATAATAGAAAGTCAGTGATGAATGGAAAAAATGAGACTTTTCTACATGGAGAAACAGATGATGTTTTCCATATATCTGGTGATTATCATTTCAAAACCATAAGTGGATGTGAAGCAGCTGATGAACGGAACAGCTGGGATAATTTTAAGCATCTAATTGCTGATGAAGAATACTGTCTTGATTCTTCAAGAGAAACAGCAGCTGCTGGTGAGTCTTCTGAGCAAGTCACCTTGAGGGTGTGCGTCGAGGACACTGGAATTGGAATTCCTTTCTCAGCGCAGGATAGGATATTCATGCCTTTTGTGCAGGCCGACAGCTCGACTTCACGAAATTATGGGGGTACTGGTATTGGCTTGAGTATCAGTAAATGCCTGGTTGAACTAATGGGTGGTCAGATAAACTTCATAAGTCGACCACAAGTAGGGAGCACATTTTCATTTACCGCAGTTTGTGGACCTTTTAAGAAAAGTTCAGTTAGTGACATGAAGAAAAATTTGGAAGATCTTCCTTCAAGTTTTAGAGGGTTGAAAGCCATTGTGATTGATAAAAAACCTGTTAGAGCTGCTGTAACTAGATACCATTTGAAGAGACTAGGGATACTAGTTAAAGTTGCAAATAGCATCAGTAAGGCTGTTGCTTTAAGTGGTTCTTTGAAATCAGGAATGTTCCAGCCTAATATTATCATGGTTGAGAAGGACACATGGATATCTGGAGAGGGTGGGGTTTTCAATATATGTAAACTGGACTGGCTGGCATGGAAAGAGAATTGTCACATGTTTAAGGTGCCTAAAATGATCCTTCTAGCAACCAATATTAGTAATACTGAATTTGATAAAGCTAAGGCCATGGGTTTCACCGACACTGTGATCATGAAGCCTCTGAGAGCTAGTATGGTGGCTGCTTGTCTTCAGCAAGTTTTGGGGGTGGGGAAGAAGAGGCAGCTAGGGAAAGACATGCCTAATGGTTCTCCTTTTCTGCATAGCCTTCTCTATGGAAAGAAAATTTTGGTGGTTGATGACAACGGGGTAAATCGAAGGGTTGCTGCAGGTGCACTAAAAAAGTTTGGAGCTGATGTGAAATTTGAAGCAACGAGCCGAATCCGGATGATGGAGAGCAAAGCAAATGAGATGAATAATGGGAGTAACTGGCATGTGCCTATATTGGCCATGACAGCTGATGTGATCCATGCTACATACGACAAGTGTGTGAAATACGGCATGGATGGATATGTCTCAAAGCCATTTGAGGAAGAGAATCTGTATCAGGAAGTTGCAAGGTTTTTCAAATCAAAGACCATCTCAGACTCATGACCGAGTGCTTCTTTTGCACTGAACTTAGCAGATAGCAACCTGCTAGAAGATTGGAGACAACACATTTTATTTTGATCACTACTACTAGCACTTTCAACATGTCGCATTTAACTTGTTCTTATGCTTTCATGCTCAGAGTCACACTTGTTTTTCCAACATATTTGAGTTGAGTTTGAGTTGAGTTGAGTTCATTGAGGGATCATTACAATTACTAACCGGCTGCAGTTTGGCATTATTAGAGTAAATGTATACAGCACGTTGCACCCCACAATTGTGTACAGATTCTGCTTAGGGGATGAGTGAAATTATGTAAATTCAATGCTTTTTTCCCACCTTGTTACTCCCCCATCAGGTTTTTATAGCAAATAGCTTTTCATGTAAAGGTGTTGTTTATGTTAAAAAATATGTGCTAATGAGTAGTGTAGCGTAACTTTGGTGCAGGCAAAAAATGATTTAGTCATGTACAAGGATGTGCAGTTAAATATTTTATGTAGCTGAAGTGATTTTATGGTTAAATTAATAATTTAGTCCCTATTTTTGC 3427 0.4065 MGLSLKMQSHHPVALRLHDQMGSKRKYTFIQAHRAWLPKFLLLWILLMALISWCIYSKMDDDTKVRRKEVLGSLCDLRARMLQDQFSVSVNHVHALAILVSTFHYYRYPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVNSEREKFEKEHGWVIKTMERKSSLVRDEYAPVIFAQETVSYLESLDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPQKPTVEERIKATAGYVGGSFDVESLVENLLGQLAGNQAILVNVYDITNYTNPLIMYGNQPEEGDRSLAHESKLDFGDPYRKHQMICRYHQKAPTNWIALTTAFLFFVILLLVGYILYGAGNHIVKVEDDFHKMEELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTELSSTQRDYAQTAQACGKALITLINEVLDRAKIEAGKLELEAVPFDLRSIIDDVLSLFSEKSRHKGLELAVFVSDKVPDIIMGDPGRFRQIITNLVGNSVKFTEQGHIFVKVHLADNRKSVMNGKNETFLHGETDDVFHISGDYHFKTISGCEAADERNSWDNFKHLIADEEYCLDSSRETAAAGESSEQVTLRVCVEDTGIGIPFSAQDRIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRPQVGSTFSFTAVCGPFKKSSVSDMKKNLEDLPSSFRGLKAIVIDKKPVRAAVTRYHLKRLGILVKVANSISKAVALSGSLKSGMFQPNIIMVEKDTWISGEGGVFNICKLDWLAWKENCHMFKVPKMILLATNISNTEFDKAKAMGFTDTVIMKPLRASMVAACLQQVLGVGKKRQLGKDMPNGSPFLHSLLYGKKILVVDDNGVNRRVAAGALKKFGADVKFEATSRIRMMESKANEMNNGSNWHVPILAMTADVIHATYDKCVKYGMDGYVSKPFEEENLYQEVARFFKSKTISDS 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03509 961 SUPERFAMILY CheY-like 698 833 IPR011006 -
Pste1g03509 961 Gene3D - 445 677 IPR036890 -
Pste1g03509 961 Pfam CHASE domain 111 291 IPR006189 -
Pste1g03509 961 ProSiteProfiles Response regulatory domain profile. 702 953 IPR001789 GO:0000160
Pste1g03509 961 CDD HATPase_EvgS-ArcB-TorS-like 498 674 - -
Pste1g03509 961 PANTHER TWO-COMPONENT HISTIDINE KINASE 24 884 - -
Pste1g03509 961 Gene3D - 885 960 - -
Pste1g03509 961 PRINTS Bacterial sensor protein C-terminal signature 621 631 IPR004358 GO:0016310|GO:0016772
Pste1g03509 961 PRINTS Bacterial sensor protein C-terminal signature 603 617 IPR004358 GO:0016310|GO:0016772
Pste1g03509 961 PRINTS Bacterial sensor protein C-terminal signature 662 675 IPR004358 GO:0016310|GO:0016772
Pste1g03509 961 PRINTS Bacterial sensor protein C-terminal signature 638 656 IPR004358 GO:0016310|GO:0016772
Pste1g03509 961 SMART CHASE_2 108 293 IPR006189 -
Pste1g03509 961 FunFam Histidine kinase 4 353 444 - -
Pste1g03509 961 FunFam Histidine kinase 4 112 327 - -
Pste1g03509 961 SMART HKATPase_4 493 678 IPR003594 -
Pste1g03509 961 CDD HisKA 381 442 IPR003661 GO:0000155|GO:0007165
Pste1g03509 961 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 493 674 IPR003594 -
Pste1g03509 961 ProSiteProfiles Histidine kinase domain profile. 388 673 IPR005467 -
Pste1g03509 961 SUPERFAMILY CheY-like 857 955 IPR011006 -
Pste1g03509 961 Gene3D - 59 111 - -
Pste1g03509 961 SMART HisKA_10 381 446 IPR003661 GO:0000155|GO:0007165
Pste1g03509 961 Gene3D - 355 444 - -
Pste1g03509 961 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 368 447 IPR036097 GO:0000155|GO:0007165
Pste1g03509 961 Gene3D CHASE domain 112 327 IPR042240 -
Pste1g03509 961 Pfam His Kinase A (phospho-acceptor) domain 381 446 IPR003661 GO:0000155|GO:0007165
Pste1g03509 961 ProSiteProfiles CHASE domain profile. 108 320 IPR006189 -
Pste1g03509 961 CDD REC_hyHK_CKI1_RcsC-like 860 949 - -
Pste1g03509 961 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 435 673 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03509 Pste-Chr1 16443988 16450601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03509 11 961 Histidine Kinase Gene Family AT2G01830 67.800 0.0 1315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03509 1 16443988 16450601 Pste1g03509 1 16443988 16450601 ECH