Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03481 ATGATCCTTTTGGATCTAATGAAAATGGTCTTGGCATTTTCTATCCTCCAGAAAAGTGCAAACCTGAATGATGAATTTGAATTGTTTTGGGGGTTGGTTTGTTATTTGGCCTTGCCGGAGAGCATATCTGCATTTTCTGTGCAGGCCACAGTGGACCATACACATCAAAGGGCTGAAGCTATTCCCCAATCCACAGCTACAACAAATTGGGCTTTTCATGTGCCAGACATAAGAACTGTAAGGGTTAGCAACATCTCATTGTCTTGTTCCAAGAAGGACATTGAAGAATTCTTTTCATTCTCTGGTGATATTAGATATATTGAGATGCAAAGGGAAAGTGATCGAACTCAGGTTGCCTATGTTACGTATAAGGATACAAAAGGAGCAGACACAGCAGTTCTCTTAACAGGTTCTAAGATAGGTGATCTATATGTCACCATCATACCTGTGGAGAAGTATCAGCTTCCCCCTGAAGCACTTCCGTCAAGTCCAACGAACCAAAGTCCTGATGCAGTTCAGAAGGCTGAAGATGTAATGAGCACCATGCTTGCTAAGGGTTTCATTTTAGGAAAGGATGCTATCAACAAGGCAAAAGCCTTTGATGAACGTCATCAGTTGACATCAAATGCCTCTTCAACGGTTGCTTCCATTGATCGTAGAATGGGTTTAAGTGATAAACTAAGTATTGGGACAGCTATGGTCAACGGAAAGGTGAAAGAGATGGATGAAAAGTATCAGCTTTCTGAGATGACAAAGTCGGCTCTTGCTGCGGCAGAGCAGAAGGCAAGTAGCGCTGGATCTGCTATCATGAGCAATCCTTATGTACTATCTGGAGCTTCATGGTTTTCTAGTGCCTTTACTGCTATAGCAAAGGCAGCTGGGGATGTGAGCATGAAGACCAAGGAGAAGGTTGAACAGGCCGAGGTGGAAAGGAAGGAGTTCATTTATAGTGAAAGGAAAGGGATTATTGATGAATTTGGAAAAACACACTTTGAGGAGGCTTCAGACATTGGCCCTGCTGTAGTTCCTGTTAATTCAGACAATGACATGAAGCTGGCAATTATGTAACTCATAACTCAAGTTGATTCCCAATCTCTTACATCCTCACATACACAGTTCGATTTATTTGTTAGCATAGTTATTGTCAGACTTCAGTTCCTGCAAGTTTGTTGTATAAAGGTAAATCTTCTTGATTGATATAGTAAATATAAAGGTTTGTCTGACAGATGTGGTTCCTAAATATGGTCAACATTCATTTCAAAAAATTATTTGTTATTTTTTGAATTATTTCTTCATTCAATTCTCCCTTTAGGTCATATGTTTACGTAGGGATTTTAATATGAACAGGACCATCAGTATAATTTAATATTGCAG 1374 0.3974 MILLDLMKMVLAFSILQKSANLNDEFELFWGLVCYLALPESISAFSVQATVDHTHQRAEAIPQSTATTNWAFHVPDIRTVRVSNISLSCSKKDIEEFFSFSGDIRYIEMQRESDRTQVAYVTYKDTKGADTAVLLTGSKIGDLYVTIIPVEKYQLPPEALPSSPTNQSPDAVQKAEDVMSTMLAKGFILGKDAINKAKAFDERHQLTSNASSTVASIDRRMGLSDKLSIGTAMVNGKVKEMDEKYQLSEMTKSALAAAEQKASSAGSAIMSNPYVLSGASWFSSAFTAIAKAAGDVSMKTKEKVEQAEVERKEFIYSERKGIIDEFGKTHFEEASDIGPAVVPVNSDNDMKLAIM 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03481 355 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 78 152 IPR000504 GO:0003723
Pste1g03481 355 Gene3D - 75 147 IPR012677 -
Pste1g03481 355 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 80 142 IPR000504 GO:0003723
Pste1g03481 355 SMART rrm1_1 79 146 IPR000504 GO:0003723
Pste1g03481 355 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 77 307 - -
Pste1g03481 355 SUPERFAMILY RNA-binding domain, RBD 68 154 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03481 Pste-Chr1 16266729 16269558 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03481 1 16266729 16269558 Pste1g03481 1 16266729 16269558 ECH