Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03480 CACTCAATCATTACAACGATTCAATTCAACGCTGCATTTTTCTCTGCAATGACAATCAGATCGAAAAAATCGAAGCGCAAGATCGAGCCGGAGCCACCTCCGGTCACTATCACGAAGAGGCTCCGGCAGAAACTCTCTCGCCGGCGACGGGAAAACATCTCACCTGTGCTTCTCATCAGCATTTCCAGCAAGAATCCTCGTTTCTCCTTCGATTCCAGCTCCGTATCAGACTTCGCCGCCGGCGAAGCTTCGTGCAACTCCAGCAGAGCTTCCATAACTGGCAAGGGAAACGCGAACTCGAGAAACGAATCGTCTATTGACTCAACTATAAATCGGAGATTCGAGAAGCGAAATGAGAACGAAGTGGAGGTGTCCGAGTGTTCGTGCGTGGACTCTGCTTCGTTCGCGAGCGAGCGAAGTAGAAATTTGATTCTCAAGTTCAAAAGAGAGAGTAAGAATCCGGAAGAAAACGATGACGTTTCGGAAGTTCTGAAGTGCACGAAATCAGAGATTACGAGCGAGGAACAGTTTAAATCAAAGTCCTCCGGTAATGGTAACGGAGACATTAAAATCTCTTCGGAGTCAAACGGAAACGACGTTGTGTCGTTTAGTTCCGGTGTTAGAGCGACTTTTAAGGAGGAAAATAATAGAAACAAGGAAAACAGAGCAGAATGCGAATACTCTCAAGGTTCTAGAAGCCTCCACATGGAAGAGAACTGCGCTGATTTAATAGCGCAATCGATTAGGAAGCAAGAATCGGATATATACGACGTCGTCGAGGATCTCGCTTGCTCTGAGGATCCATGTTTCTCGTACTGTGACGACGACGTATCCGAGTATTGTTCTAGCCAGGGAACTGTGTTCCCTGAATTTCATTCCCAAATTTTTGGCGAATGTTCGCAGCCTGAGCTTTCGGATTTCTCTCCGTCGCTGCTCATGGATTCCGGAAGCCAGTTTTCGCAGGGATCCGTCGGAGAAACTGCTTCGCCGATGTATTTGTTGTTTCTTCAGTACCGCAAGGAGTTCACAGCGCTAGTTTCTGTTTCTCCAGTGATTAACGCTTTCAGCGTCGAAGATCATGTTAATTTTAAGAGATTCGAAGATTCGGATGACGAAGAGAGCTACCAGATGCTGAGGAAGAGGGAGAGTAAGCAAGGTTTTTTGTTGAATTATAGTCAGAGATATCACTCTGCCACTGAATTCGCAGAGACCGTGCTAGAGCAACGTGCGCAAATGGTTCACTGGATCGTTGAGCAATCTGGTCGTAGACAGCTTCGGCAAGAGACAGTTTTTCTTGGAGTCAACCTACTTGACCGTTTCCTAAGCAAAGGATACTTCAAAGCCAAAAGAAACCTTCAAATTGTTGCACTAGCTTGCCTCACATTAGCGACCAGGATCGAAGAAAACCAACAACATAACAGGGTGGGGCAAAAAACTTTCTACGTCGGAAGCAATGTGTACAGTAGATGCGATGTGGTAGCTATGGAGTGGGTGGTGCTGGAGGTGCTTAACTTTCAGTGCTTTCTGCCTACCATCTACAATTTCTTGTTTTACCTAAAAGCAGCCAATGCTGATTCAGTCGTTGAGAAGAGGGCCAAGTATATGGCGTTGCTGGCACTGTCAAGTCAAGAGCAGCTGTGTTACTGGCCATCAACAGTTGCTGCAGCAATTGTAATCCTGGCTTGTCTTGAAGTCAATAAAAATTCATACTTTAAAGTCATAGAGATCCACGTTAGATCAAAGGATGAGAATTTGTATAAATGCATAGAGAGCCTGGACTGGTTATACGCTATCTAGGCTAACATAGTAGTTGTCGTGGAGGCAGTGGCTATACAATTCAGTTTGTCGGCGATTGTTCCTAACCATCAGAAGACAAAATGGCTTTCTTATGCATGGTTGATTCTTCATTATAATACTGAATACATTCCATTTGTTTCCCTACCTGCGAGCAAGCGAATTTTGTTCTTGTTCCTATGTAACCAGATTGATTGTTCTGTATACCAATATAGAAAAAATAAACATATTTTTTCGGAAATGGTGAGAACCTTACAATGGACAGTAAACTCAGCTCTTAACTGTTAATGAC 2086 0.4444 MTIRSKKSKRKIEPEPPPVTITKRLRQKLSRRRRENISPVLLISISSKNPRFSFDSSSVSDFAAGEASCNSSRASITGKGNANSRNESSIDSTINRRFEKRNENEVEVSECSCVDSASFASERSRNLILKFKRESKNPEENDDVSEVLKCTKSEITSEEQFKSKSSGNGNGDIKISSESNGNDVVSFSSGVRATFKEENNRNKENRAECEYSQGSRSLHMEENCADLIAQSIRKQESDIYDVVEDLACSEDPCFSYCDDDVSEYCSSQGTVFPEFHSQIFGECSQPELSDFSPSLLMDSGSQFSQGSVGETASPMYLLFLQYRKEFTALVSVSPVINAFSVEDHVNFKRFEDSDDEESYQMLRKRESKQGFLLNYSQRYHSATEFAETVLEQRAQMVHWIVEQSGRRQLRQETVFLGVNLLDRFLSKGYFKAKRNLQIVALACLTLATRIEENQQHNRVGQKTFYVGSNVYSRCDVVAMEWVVLEVLNFQCFLPTIYNFLFYLKAANADSVVEKRAKYMALLALSSQEQLCYWPSTVAAAIVILACLEVNKNSYFKVIEIHVRSKDENLYKCIESLDWLYAI 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03480 582 SMART cyclin_7 398 485 IPR013763 -
Pste1g03480 582 Pfam Cyclin, N-terminal domain 380 490 IPR006671 -
Pste1g03480 582 Gene3D - 383 485 - -
Pste1g03480 582 MobiDBLite consensus disorder prediction 159 179 - -
Pste1g03480 582 SUPERFAMILY Cyclin-like 353 490 IPR036915 -
Pste1g03480 582 Pfam Cyclin, C-terminal domain 494 576 IPR004367 -
Pste1g03480 582 Gene3D - 486 581 - -
Pste1g03480 582 PIRSF Cyclin_A_B_D_E 355 581 IPR046965 GO:0016538|GO:0044772
Pste1g03480 582 PIRSF Cyclin_A_B_D_E 53 259 IPR046965 GO:0016538|GO:0044772
Pste1g03480 582 PANTHER CYCLINS 328 564 IPR039361 -
Pste1g03480 582 MobiDBLite consensus disorder prediction 160 179 - -
Pste1g03480 582 SUPERFAMILY Cyclin-like 494 578 IPR036915 -
Pste1g03480 582 MobiDBLite consensus disorder prediction 71 90 - -
Pste1g03480 582 ProSitePatterns Cyclins signature. 393 424 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03480 Pste-Chr1 16259689 16265699 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03480 391 545 Core Cell Cycle Gene Families AT5G11300 35.185 1.62e-19 89.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03480 1 16259689 16265699 Pste1g03480 1 16259689 16265699 ECH