Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03465 GGGTTGGGTGGCCATTGTGGATCAGTGAGAAAGCTCTTCCAAAAGATAATTCGAGATTTTTTCTCTTTATTTTCTTAGTCATTAATAATATTATTACTATTTTTTATTTTTATTTTCTTTATTCTACAAGGCGTTGGTTTTTGGTTGAATGATATGGATTATGGATATGAATTCTAATTTTTTTTACATTCACTGAGTGAAAGTGAAATTGGAATTGAAGTCTCCACCAAACTGGTAATTTTCTTGAACTGTTAGTTAATTCCATTTGGGTTGCTTGTTTTTATCTTTCCTTTGCTCCTTTGGTCTTTTAGGCCATCTGGTTCTGACTTCCAAGTTCAGTCCATTTATGACATCAATCTCTGGGGGGTTGTTTGGTTGCTGTTTCTTGTTGGAGCTGTTTATGTGATCTGAATCTATTCCATTCCTTTTGTTCTTCTCTCTCTCCTGGATTGCTGGCAACTACATGTTTCATTTGTCCCTTGCTCTGATCCCTTTCTCCAAGCTCACCCTCAGACTAGTTCTCCTCTCCCTTTTGATGCTCTTCATTGTTAGTCACCACAGATTCACCACTTGCACCTCTTGCCATTTCATGCTTTGTAATTTCTCTTTCACTCAATTCAGGACAAGTATAAGTTGACCCATAACTCAAAGCACAGTCTTGTTCTGTCCAGTTCGGTGCTTCACCTCACACTCTTTTGTTCTTTATGCATTTGGTTGGTTTGGGGTTACCCTTTTTGGTTAAAGGGGTTGTGGACCTTGTTTGTGAGATGGATATTGGTGGTTATTGAGGATAACCTCGGATGGAGCTTGTGTGTTATGTGGTTATATAGTGTCTCAAATCGTTGTGAGTTAGCTTGTGATTGATTGATTAATTACAAGGATGGTTTCAAAATCCTATTCAAACCTATTGGAGTTGGCCTCTGGAGAGGCTCCATCATTTGGGTACATGAACAGGAGAATTCCAAGAATTATGACTGTGGCTGGGTTGATATCTGATGTTGATGATGACCCAGTGGAGAGTGTGTACTCTGATCCCTCATCGTCTACCGCACACCGAGACCGGATAATCATGGTGGCTAATCAGCTTCCCATAAGGGCTCAAAGGAGGCCAGATGGGAATAGGAGTTGTTGGTCTTTTGAGTGGGATGAGAATGCCCTTCTTCAGCTGAAAGATGGGTTAGGGGATGATGATATTGAGGTTATTTATGTTGGATGTCTTAAGGAGGAGGTGCATCCAAGTGAACAAGATGAGGTTTCTCAGACACTTCTTGAGACCTACAAGTGTATCCCAACTTTTCTCCCACCTGACCAGTTCACTAAGTACTATCATGGTTTTTGCAAGCAGCAGTTGTGGCCACTGTTCCATTACATGTTGCCCTTGTCACCAGAACTTGGTGGGAGGTTTAATAGATCACTGTGGCAGGCTTATGTGTCAGTCAATAAAATTTTTGCAGATAGGATTATGGAAGTTATTAACCCTGAAGATGATTATGTGTGGATACATGATTATCATCTCATGGTCTTGCCAACTTTCTTGCGGAAGAGATTCAATAGAGTGAAACTGGGGTTCTTCCTACACAGCCCATTCCCTTCATCAGAAATATATAAAACATTGCCTGTTAGGGAGGAAATCTTGAGAGCACTCCTTAATTCAGATTTGATCGGCTTCCACACGTTTGATTATGCGCGGCATTTCCTCTCCTGTTGTAGCCGGATGCTTGGTCTTACCTACGAATCCAAGCGAGGTTATATTGGTATTGAGTACTATGGTAGGACTGTTAGTATCAAAATTCTTCCAGTTGGTATTCACTTGGGTCAACTTCAATCTGTTTTGAGGCTGCCTCAGACTGAAGAAAAAGTATGTGAGCTTATTAGACAGTTTTCTGATAAAGGCAGGACACTGTTGCTTGGGGTGGACGACATGGATATTTTCAAGGGAATTAGTTTGAAGCTATTGGCCATGGAGCAGCTTCTCATTCAGCATCCTGAGTATAAGGAAAAGGTAGTGCTGGTCCAGATAGCTAATCCTGCAAGGGGAAGAGGGAAAGATGTGAAGGAAGTGCAAGCCGAGACAAAGGCCACGGTGAAACGGATTAATGAAACGTTTGGGAAACCTGGGTACGATCCTGTAATTCTGATTGAGGAGCCTCTCAAGTTTTATGAGAGGGTTGCATACTACATTGTTGCCGAGTGTTGTTTAGTCACTGCGGTAAGGGATGGCATGAATCTCATACCTTATGAATATATCATCAGTAGACAAGGAAATGAAACGTTGGATAAAGTTTTGGGTTTAGCTTCCTCCCCTAAGAAGAAAAGCATGTTAGTTGTGTCTGAATTCATTGGCTGTTCCCCATCTTTAAGTGGAGCAGTCAGAGTGAATCCCTGGAATATTGATGCAGTAGCTGATGCAATGGACTCTGCGTTAGCAATGGCTGATTCGGAGAAAGAACTTAGGCATGAAAAGCATTATAGATATGTTAGTACTCATGATGTTGGTTATTGGGCTCGAAGTTTCCTGCAAGATTTGGAAAGGACTTGTAGTGATCATGTGCGGCGAAGGTGGTGGGGTATTGGGTTTGGATTAAGCTTTAGAGTTGTTGCACTTGATCCAAACTTCAAGAAGCTCTCGATGGAGCATATAGTTTCGGCTTACAAGCGGACAACAACTAGGGCAATCCTTCTTGATTACGATGGTACCCTAATGCCTCAATCATCTACCATTGATAAGAGTCCTAGCAGTAAATCCATTGAAATTCTTAGTAGTTTGTGTAAAGATAAGAACAACGTGGTTTTCCTTGTTAGTGCCAGAAGCCGAAAGCTGCTTTCTGAATGGTTTTCTCCTTGTGAAAATCTTGGAGTTGCGGCTGAGCATGGTTACTTTATAAGAATGAAGCGAGACGAAGAGTGGGAAACACATGTTGCCGCCACGGACTGTAGTTGGAAACAAATTGCAGAACCTGTAATGAAACTTTATACTGAAACAACTGATGGATCCACCATTGAAGACAAGGAGACTGCCCTTGTTTGGTGCTATGAGGATGCAGATCCGGACTTTGGGTCATGCCAAGCGAAGGAACTTCTTGATCATCTTGAGAGTGTGCTGGCAAATGAGCCAGTAACAGTCAAAAGTGGCCAGAGTAATGTAGAGGTTAAGCCACAGGGTGTGAGCAAGGGAATAGTGGCCAAACGCCTACTTTCTGCTATGCAAGAAAAGGGAATGTACCCTGATTTTGTTTTGTGTATAGGAGATGACAGGTCAGATGAAGACATGTTTGAGGTAATCACCAGTTCAATGGAAGGTCCAATTGCGCCACGGGCCGAAGTATTTGCATGCACGGTTTGTCGAAAACCCAGTAAGGCTAAGTACTATTTAGATGATACAACTGAGATAGTGAGATTGCTTCAGGGCTTAGCCTGTGTTTCAGAGAACAAATAGTTTCATTTTCTTAAGAACAAGTAGTTTGTTAAGCTTGGGAAAAGTGGTGGTGGCGAGAGGCATTATTATTATTATTATTGTGCTTGCTTTACTTTGTCATTGAAAATGTAGGCTCAGTTGTGCTGCCCTTATCATACACACGATTAATATTATTGTTTTCCTTGATATTCCATGTAAATTATCCTAGTTGTTACTGAGAGAAGTTCTGTATCGGATTATACTCATTAAATGCTTGATTTCTATCAGGAAAACTTGTACATATAGTTGGTTCCTTTCCAGCCATGAACTCATGTTATGTATTCCTTTCAGCCATGGATGTTTGGATGTGAACGGGATCTTGTGAGTCTTAGTTTTGTTCATGGTAGTGATCGAGTGAATTTGACTAGCACTTTCTGATAAGATACTTGTTTGTTA 3850 0.4119 MVSKSYSNLLELASGEAPSFGYMNRRIPRIMTVAGLISDVDDDPVESVYSDPSSSTAHRDRIIMVANQLPIRAQRRPDGNRSCWSFEWDENALLQLKDGLGDDDIEVIYVGCLKEEVHPSEQDEVSQTLLETYKCIPTFLPPDQFTKYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPVREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHLGQLQSVLRLPQTEEKVCELIRQFSDKGRTLLLGVDDMDIFKGISLKLLAMEQLLIQHPEYKEKVVLVQIANPARGRGKDVKEVQAETKATVKRINETFGKPGYDPVILIEEPLKFYERVAYYIVAECCLVTAVRDGMNLIPYEYIISRQGNETLDKVLGLASSPKKKSMLVVSEFIGCSPSLSGAVRVNPWNIDAVADAMDSALAMADSEKELRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQSSTIDKSPSSKSIEILSSLCKDKNNVVFLVSARSRKLLSEWFSPCENLGVAAEHGYFIRMKRDEEWETHVAATDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQSNVEVKPQGVSKGIVAKRLLSAMQEKGMYPDFVLCIGDDRSDEDMFEVITSSMEGPIAPRAEVFACTVCRKPSKAKYYLDDTTEIVRLLQGLACVSENK 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03465 851 Gene3D Glycogen Phosphorylase B; 53 315 - -
Pste1g03465 851 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 553 - -
Pste1g03465 851 Gene3D Glycogen Phosphorylase B; 316 534 - -
Pste1g03465 851 NCBIfam HAD-IIB family hydrolase 599 801 IPR006379 -
Pste1g03465 851 SUPERFAMILY HAD-like 597 845 IPR036412 -
Pste1g03465 851 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 596 714 - -
Pste1g03465 851 FunFam Alpha,alpha-trehalose-phosphate synthase 317 534 - -
Pste1g03465 851 Pfam Trehalose-phosphatase 600 834 IPR003337 GO:0003824|GO:0005992
Pste1g03465 851 CDD HAD_TPP 598 839 - -
Pste1g03465 851 Pfam Glycosyltransferase family 20 61 550 IPR001830 GO:0003824|GO:0005992
Pste1g03465 851 NCBIfam trehalose-phosphatase 596 844 IPR003337 GO:0003824|GO:0005992
Pste1g03465 851 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 845 IPR001830 GO:0003824|GO:0005992
Pste1g03465 851 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 315 - -
Pste1g03465 851 FunFam Trehalose-6-phosphate synthase 10 728 851 - -
Pste1g03465 851 Gene3D - 726 851 IPR023214 -
Pste1g03465 851 Gene3D - 596 725 IPR023214 -
Pste1g03465 851 CDD GT20_TPS 61 550 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03465 Pste-Chr1 16152975 16157519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03465 1 850 Trehalose Biosynthesis Gene Families AT1G68020 79.861 0.0 1440
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03465 1 16152975 16157519 Pste1g03465 1 16152975 16157519 ECH