Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03326 ATGGACTCTAAGACCTTGTGCTTCATAACCCATCAAGCCGTTTTCAACGCTGTTCGATGTGGGGACCTTGAAGGGCTGAAGGACCAGTTCGAGAACAAGGCTGAGTCCTCATCCCAGCTCATGTCTATGCAGAACGATGCAGGGGAAACCCTGTTGTATATAGCTGCAGACCTTGGTCTCCACCAGGTCTTCAGCTTCTTGCTTAGTTTATGTGATGTGGAGGTGCTCAAGATCATGGCCAAATCGGATATGAACCCCCTTCATGTTGCAGCAAAAAATGGCCATTTCGGTAGATTTTTCTTCTCTTCAAGTATTCAATTGGATATTGTAAGGGAAATTTTAAGCACTTGGCCTGAAGCTTGTCAGTTATGCAACTCCTCTAATACTAGTCCCCTATATTTCGCTGCTGTTCACGATCATTTGGATGTAATGAATGCAATATTGGATGTTGATGTAAGTTCAATGATGATTCTAAGGAAAAATGGCAAAACTGCTTTGCACAATGCTGCTAGGTATGGCGTCCTTCGCATTGTAAAAGCACTGATTGCTCGGGATCCAGCAATAGTCTGCATCAAAGATAGAAAGGGTCAAACTGCACTGCATATGGCTGTGAAGGGACAGTGTACTTCAGTGGTGGAGGAGATATTACAAGCTGACCCTACTACATTGAATGAACGAGATAAGAAGGGTAACACGGCTCTTCACATGGCTACCAGGAAGAGCCGTTCACAGATAGTGAGCTTTTTGTTAACCTACACAGCTATGGATGTCAATGCCATCAATAATCAGAAGGAAACAGCCTTGGATTTAGCAGATAAACTTCGATATGGAGATTTAGCTTTGGAGATCAAGGAGGCCCTTGCAGAATGTGGTGCCAAGTATGCCAGGCATATTGGGAAAGTGGATGAAGCAATGGAACTAAAAAGAGCTGTGAGTGATATAAAGCATGAGGTGCAATCTCAGCTTATACAGAACGAAAAAACTCGAAGGAGAGTTTCTGGAATTGCTAAGGAATTAAAGAAAATTCATAGAGATGCAGTTCAAAACACCATCAATTCTGTCACTGTAGTTGCTGTACTTTTTGGTTCAATAGCATTCATGGCTTTGTTCAGTTTACCCGGTCAATATCGAAAAAAGCAACCAGAGGCAGGGGAGGCAAATATATCTCATGATGTTGCCTTTAGTGTTTTCTGCCTTTTGAACGCTACTGCTCTTTTCATTTCCCTTGCAGTTGTTGTTGTTCAAATCACTTTGGTAGCTTGGGATACAAGGTCTCAAAGGCAGGTTGTGTCAGTGGTTAACAAGCTGATGTGGGCCGCATGTGCCTGCACTTGTGCGGCTTTTCTTGCTATATGCTTTGTGGTTGTTGGAAAAGAAACATGGCTGGCTATTAGCGTCACACTTATGGGGGCACCAATGTTACTTGGGACTCTAGCATACTTGTGCTACTTTGTTTTTAGGCGACATTTTGGACTCCGTGGTGATTCCCAGAGATTAGTCAAGAGACCAAGTGGAAGCAAATCATTCTCATGGTCATACTCAGTAAATATATCAGATGTGGAGGATTATGATTCTGATCTTAAAAATATCTATGCTCTATAAGTATTTTAACTTGAACTGATATCCTCCCACCTTAATGGAAAGTGAAATGTTCACTCACTAGGACTCAGCTGCTTAATTTGCATTTGCCTAGTAAGTTTTACACAAGAGAATCAGTTGGATAGGCTAATACATATGAGGGATAATCAGAAGTCAGATTTGGATTTATGTACATGGAAAAAATAATACAACGAAAGTCCTATGAAAGCTTGTATCTAGCTCTAGATTTTTGAAAATGGTTCAGCTCCAAAATATCCTTCCATAGTTCCTTGGTGCTTGCAGAATTGTTGGCTGAGTTGCCTACCTAAATTGGCAAATCTTGCCTTGCAAGTGGATGGTTTTATTTGGTGGGATTTTTTGCCTTCTTGTATTAAAGAACCTTTCTTTAGAAAAAGATTAGGACTACCTAGTTATAGATTTTGCTGGTTGTGGGTTTGGTTTGGTCCCCCCACTTTTTATTTCTTGTATTTATTCCTGCTTTTCTTTTTTAATAAAACATGAGTATGCTGCATATGATCCTTATGTTCAGTGGTGCCAACCTAGTTGGAACCATTGATCCTATTGTGATGCAATGCATTCTCCAC 2183 0.4095 MDSKTLCFITHQAVFNAVRCGDLEGLKDQFENKAESSSQLMSMQNDAGETLLYIAADLGLHQVFSFLLSLCDVEVLKIMAKSDMNPLHVAAKNGHFGRFFFSSSIQLDIVREILSTWPEACQLCNSSNTSPLYFAAVHDHLDVMNAILDVDVSSMMILRKNGKTALHNAARYGVLRIVKALIARDPAIVCIKDRKGQTALHMAVKGQCTSVVEEILQADPTTLNERDKKGNTALHMATRKSRSQIVSFLLTYTAMDVNAINNQKETALDLADKLRYGDLALEIKEALAECGAKYARHIGKVDEAMELKRAVSDIKHEVQSQLIQNEKTRRRVSGIAKELKKIHRDAVQNTINSVTVVAVLFGSIAFMALFSLPGQYRKKQPEAGEANISHDVAFSVFCLLNATALFISLAVVVVQITLVAWDTRSQRQVVSVVNKLMWAACACTCAAFLAICFVVVGKETWLAISVTLMGAPMLLGTLAYLCYFVFRRHFGLRGDSQRLVKRPSGSKSFSWSYSVNISDVEDYDSDLKNIYAL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03326 533 SMART ANK_2a 82 122 IPR002110 GO:0005515
Pste1g03326 533 SMART ANK_2a 195 225 IPR002110 GO:0005515
Pste1g03326 533 SMART ANK_2a 229 259 IPR002110 GO:0005515
Pste1g03326 533 SMART ANK_2a 161 190 IPR002110 GO:0005515
Pste1g03326 533 SMART ANK_2a 47 75 IPR002110 GO:0005515
Pste1g03326 533 SMART ANK_2a 127 157 IPR002110 GO:0005515
Pste1g03326 533 Pfam Ankyrin repeat 230 262 IPR002110 GO:0005515
Pste1g03326 533 Pfam Domain of unknown function 346 454 IPR026961 -
Pste1g03326 533 Gene3D - 4 149 IPR036770 -
Pste1g03326 533 ProSiteProfiles Ankyrin repeat region circular profile. 229 254 - -
Pste1g03326 533 ProSiteProfiles Ankyrin repeat region circular profile. 161 182 - -
Pste1g03326 533 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 17 512 - -
Pste1g03326 533 ProSiteProfiles Ankyrin repeat profile. 229 262 IPR002110 GO:0005515
Pste1g03326 533 ProSiteProfiles Ankyrin repeat profile. 161 182 IPR002110 GO:0005515
Pste1g03326 533 Pfam Ankyrin repeats (3 copies) 132 221 IPR002110 GO:0005515
Pste1g03326 533 SUPERFAMILY Ankyrin repeat 14 280 IPR036770 -
Pste1g03326 533 Gene3D - 150 309 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03326 Pste-Chr1 15244596 15248771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03326 1 533 Miscellaneous Gene Families AT2G01680 62.936 0.0 679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03326 1 15244596 15248771 Pste1g03326 1 15244596 15248771 ECH