Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03302 TGTGAAGTGAAGGAAGCACAGTATGCTCCGAAAGCTTTGGAAACGTTGTTGTGACCGAGGTGTGAGTCCGACATTCGTCTTCTCCTCAGTTTTCCATACGAGAACATTCAATCTCTCTAAGCGACACTTGGTCTCCAATGATGTGGGTTGGCGATGGAGGATCGAAGAAGAGCCCTCGGGTTTCGTTAACAGCGAAGAAGAAACCGCGCTTCAACTTTCTCATCCTTGGCCCGAATGGCTCCATCTCCTCCAGTGCCTTCTCCTTAAGGGATACTTTATTCACCAACGTCAAAACATGCTTCACAATACGGATTCCAATGCCATCAGAACCGCTTGCCTCAATTTCGGTAGAGACCATTTTCATCTTCTAAGATTCTTGTCTCAAAAAGATATAGGAGTTACTGTGGCACTTGGATGTCCGAGCTTAGATAGGAAAGTGATCAACTCAGGAAAGCGTCTGAGAGCATATGTGGGTATTGACGAGGGAAATGTATGCAGTTCCTGCAATTTGAGGGGGGACTGTGAAAGGGCGTTCGTGAAGGCACGTGAAGATGAAGGTGGAAGAACAGTGGATGTTATGCGTATTATTTTAACCTATGGGCTTGATCCAATTATTCGTTCAGTGGAGAACAAACCATGTCTCACTAAAAGGGTAGAAGAATCTGTGAGAAGACTGCTTAAAGATATAGTAGAACACAGTACTAAAGAGGAAAATTCTAATTTTCCAGACTCCACAAAGGTTGTCATGGAACATTTGCATCCCAATCAGCAAGACAAGGGCAAAATCGATGTTCCAATGATGAAGAAAGGCGACTGGCTTTGCCCCAAATGCAATTTCATGAACTTTGCAAGAAACATCAGGTGCTTGTGCTGTGACAGCATCTTTGAGGAAAGAATCAAGCAATTGAAGGAGGATAACAACCACCTACCTTTGAAAAAGGGAGATTGGATATGCAATACATGCAATTTCCTAAATTTTGCAAAGAATACAAGATGTTTGCAATGCAAAGAGAGGCCTTCCAATCGTCACATTAATCCTGGGGAGTGGGAATGTGACTCGTGCAACTACATTAATTTCAGAAGAAACATGATTTGCCTGAAATGTGATCATAGACGACCTATAGTGTCAAAGGCGTCAAACTCTTCCCTTCAACCACAGCCACAAGATACAGACCACTATAAGAATAGCAAATTTGCCTTTGTGGAACATCAGAGTGATAAAAGTTATGATTCTGAAAGAAAGAACAGGAAAAGAGATTCACCTATGTGGAGATTTGTAGAGGATAAATATGAAAATCCCAAGTGCTTAAATAAATCAAATGATCCTTCTAAATTTATAGATTTTCCTATTGTGGGAGGTAAGACTCACTTGTCTGAGGTACAAAGGCGAGAAGCATACAAGACTGAGTTTCCAAATCAGAGTAGAAGGCCTTCATGGCAAAGTGAAACTGATGATGAGTTTTGTTCTTCAGATAACCTGAATACTGATGATGAGTTTTGTTCTGCTAATAATCAGAGTACTGATGATGAAGAAATGGACGAATGGTTTGGTAAAGGTAAGATTGAAAGGTAGGAATTCTAGAAGAGTTTAATTTCTATGTACCATGAATTTGGTTTTTACATTATCAATCAATTAAAA 1639 0.4051 MLRKLWKRCCDRGVSPTFVFSSVFHTRTFNLSKRHLVSNDVGWRWRIEEEPSGFVNSEEETALQLSHPWPEWLHLLQCLLLKGYFIHQRQNMLHNTDSNAIRTACLNFGRDHFHLLRFLSQKDIGVTVALGCPSLDRKVINSGKRLRAYVGIDEGNVCSSCNLRGDCERAFVKAREDEGGRTVDVMRIILTYGLDPIIRSVENKPCLTKRVEESVRRLLKDIVEHSTKEENSNFPDSTKVVMEHLHPNQQDKGKIDVPMMKKGDWLCPKCNFMNFARNIRCLCCDSIFEERIKQLKEDNNHLPLKKGDWICNTCNFLNFAKNTRCLQCKERPSNRHINPGEWECDSCNYINFRRNMICLKCDHRRPIVSKASNSSLQPQPQDTDHYKNSKFAFVEHQSDKSYDSERKNRKRDSPMWRFVEDKYENPKCLNKSNDPSKFIDFPIVGGKTHLSEVQRREAYKTEFPNQSRRPSWQSETDDEFCSSDNLNTDDEFCSANNQSTDDEEMDEWFGKGKIER 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03302 516 SUPERFAMILY Ran binding protein zinc finger-like 332 366 IPR036443 -
Pste1g03302 516 ProSiteProfiles Zinc finger RanBP2 type profile. 305 334 IPR001876 -
Pste1g03302 516 Gene3D - 334 367 - -
Pste1g03302 516 Gene3D - 296 333 - -
Pste1g03302 516 Gene3D - 254 287 - -
Pste1g03302 516 ProSiteProfiles Zinc finger RanBP2 type profile. 338 367 IPR001876 -
Pste1g03302 516 SUPERFAMILY Ran binding protein zinc finger-like 259 286 IPR036443 -
Pste1g03302 516 MobiDBLite consensus disorder prediction 464 495 - -
Pste1g03302 516 SMART zf_4 307 331 IPR001876 -
Pste1g03302 516 SMART zf_4 263 287 IPR001876 -
Pste1g03302 516 SMART zf_4 340 364 IPR001876 -
Pste1g03302 516 ProSiteProfiles Zinc finger RanBP2 type profile. 261 290 IPR001876 -
Pste1g03302 516 MobiDBLite consensus disorder prediction 459 516 - -
Pste1g03302 516 PANTHER ZINC FINGER PROTEIN 302 426 - -
Pste1g03302 516 ProSitePatterns Zinc finger RanBP2-type signature. 342 361 IPR001876 -
Pste1g03302 516 ProSitePatterns Zinc finger RanBP2-type signature. 309 328 IPR001876 -
Pste1g03302 516 SUPERFAMILY Ran binding protein zinc finger-like 298 331 IPR036443 -
Pste1g03302 516 ProSitePatterns Zinc finger RanBP2-type signature. 265 284 IPR001876 -
Pste1g03302 516 Pfam Zn-finger in Ran binding protein and others 340 362 IPR001876 -
Pste1g03302 516 Pfam Zn-finger in Ran binding protein and others 261 286 IPR001876 -
Pste1g03302 516 Pfam Zn-finger in Ran binding protein and others 305 329 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03302 Pste-Chr1 15140071 15142955 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03302 57 400 EF-hand Containing Proteins AT1G55040 37.027 3.10e-63 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03302 1 15140071 15142955 Pste1g03302 1 15140071 15142955 ECH