Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03250 ATGGTAAGGTGTGACAGACGCGCACGTGGTCCTTTACCGGACAATCCGGTTATTCTACCGTGTTTTGCTCTGAAAATGGAGAGAGATTTTCTTGGTCTGAGCTCAAAAGAACCATTGGCTATGGTGAAGGAAGAGATGAATAATAATAGTGGGTGCAAAGACTCAGGCATATTTCACAAAAGGAGCGGTGGTAAAATGGCCCTTCATGAACAAAGTATCTGTCCATCCTCGTTTGATGTCTTTCAACGCTCCTCAGGCCAAATGCTAGAGAAATCTGTCAATCATGATGGACAAGGTGGCATTCATTTTTCTCTGACACCGTATCCTGCACTACATGATGTGAATTCTGTGAATCGCCCTCATGATGTGAAGATGTTTTCAGTTCCCAATCGAGCAATTTCAGTTTCAATGGGACACCCATCCCTAAAGAATAAATTTGCAACTGTTGGTCAGACTATGAACGGTGCTAGTGTGAAGCAACCACTACTCGGGGGAATACCTGTTACAGCGCCTCATTCAGCTCTTCCCATTGTTGGTGCTTCTCCTGGAATGACTGAAACATGTGTGAAACCATCTCTATGTACTCCTAAACTTACCATCTTCTATGCGGGCACTGTGAATGTCTTTGATGATGTCTCCCCTGAGAAGGCACAAGCTATCATGATGTTGGCTGGGAATGGCCTATCAGCGGCTCCTAACGTGGCACCACTCAATGTTCAGGCTCCCAGCTTGAAGTTGGCAATTAGTGATGGTGTTCCTGCTAGTCAACCCATACCACCCTGCTCTAGTCTTTCAAGTCCTTTATCTGTTTCTTCGCATACTGGTTCACAGTCAGGGAGTGGCTCAAGTAGCAATGATGAATTTCTGACAGCTAAAACATCAGGAGGTCCCACTGCTTCTGTTAACATAGTGGAGACTCCAAAAGTAGTCAACACAACCACCATGCTACCATCAGCTGTGCCACAGGCTCGCAAGGCATCATTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGATGAGTGCAGCACCATATAACTTCAACACAAAGTCTGAGAATGTGCCACAGCAGAATACTATTGTTTCTAAAAGCACTGCAGGTGTAGATGCTGATGCTCTGTCAACCAAGCTCGGAGAGGAGTAACCCCTTCTTATAGAAGGAAACTACTTCAGATAGAGAATATTTGCAGTAACTTGTAATATAGTAATGTTAAATACAGAAAATTTTATTTTTATCCGAACTTATGCTGAGATTCTTATGTATCAAACTATGTTCACTCCATAGGTATGGCCTTACCTTAATTATTTTGGTGTAGGGCTTTACCTTATTACCTGAAACTGGTTGGATTTTACCTTCCAACAGTATAGCATTAGCATATAGACCACTATGTAACTATCTCTGACAATTTGTTAATTGTGGGAATTAAAAGCAATGTTATATATTTGTATTTA 1451 0.4245 MVRCDRRARGPLPDNPVILPCFALKMERDFLGLSSKEPLAMVKEEMNNNSGCKDSGIFHKRSGGKMALHEQSICPSSFDVFQRSSGQMLEKSVNHDGQGGIHFSLTPYPALHDVNSVNRPHDVKMFSVPNRAISVSMGHPSLKNKFATVGQTMNGASVKQPLLGGIPVTAPHSALPIVGASPGMTETCVKPSLCTPKLTIFYAGTVNVFDDVSPEKAQAIMMLAGNGLSAAPNVAPLNVQAPSLKLAISDGVPASQPIPPCSSLSSPLSVSSHTGSQSGSGSSSNDEFLTAKTSGGPTASVNIVETPKVVNTTTMLPSAVPQARKASLARFLEKRKERVMSAAPYNFNTKSENVPQQNTIVSKSTAGVDADALSTKLGEE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03250 380 MobiDBLite consensus disorder prediction 356 380 - -
Pste1g03250 380 SMART tify_2 191 226 IPR010399 -
Pste1g03250 380 ProSiteProfiles Tify domain profile. 191 226 IPR010399 -
Pste1g03250 380 MobiDBLite consensus disorder prediction 259 300 - -
Pste1g03250 380 Pfam tify domain 197 225 IPR010399 -
Pste1g03250 380 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 145 354 IPR040390 -
Pste1g03250 380 Pfam Jas motif 321 345 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03250 Pste-Chr1 14811944 14815837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03250 123 351 Tify Gene Family AT3G17860 39.834 1.60e-26 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pste1g03250 tify 4.6e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03250 1 14811944 14815837 Pste1g03250 1 14811944 14815837 ECH