Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03109 CGCAGGCCAAGCATAAACATAAACAAGTTGGAATCTCTCCCATGTTTTTCTTTATAAGCTCATAGCTTCTGAAGTGAAAAGGAGTTTAGTTATGGCAGAAAACAAAGATGAAATATATTCTGAATGTTCACCAGGCTTAACCTCTTCAATGGGTAGCAGGAGCAGATACTTGTTTCATAGATTATGCGGTTGTGCCACTTCATGGAACAAAAGCAACACACCAAGAAGTCGAAGAATTTTCCACAGAGATGTGGAAAAAGAAGAAGAATTCCAGTATGCAAGTAGTCACTGTCTCTCATCATACTATAGTGTCTTTGTGGTTCGACTAGCAATCATGGTGATGCTAGCCATCTTGATAGGGCTTCTCACTATACTCACTTGGCATTTCACGAAGATTTATACAACGAAATCACTTAACAGTTTGGCATATGGTTTGCGTTATGAACTTCTGCAACGCCCTGTTTTGAGGATGTGGAATATTTTAAACTCTACTGCTGAAATTACAACAGCTCAAGTCAAACTGTCTCAGTATGTGATCAGACGTCACAGCAACCCTGCGACTCAAGCAGAGCAAGTTGAGCTGTACGAAGCGATGAGGGCTGTAACATGGGCGTTATTTGCTAGTCGGAAAGCTCTAAACTCTATAACTATCAACTATAAGAACGGATTTGTTCAAGCATTTCACAGAGATTTGAAGGACAACAATACATTTTACATTTATTCTGATCTTTCAAATTACTCCATGGGTGCTAGCAACTCTAATGAGGTCAATTCCGTTTCAAAACATCAAGCTTTGGATGATAAGGCCCTTCGTGGTAACTATTCTGCAATCTGGTACCGCGAACCACTTGATCCTGTGAGTGGTGAAAAGATTGGAAAAGCTAATAAAATTGCACCTGAAGATTTGATCAACATAGCTGGCCTTTCCCAAGTACCTGATGGTGTAGCTTCGTGGCACGTCGCAGTGAGCAAGTTCACTGATTCACCATTGCTTTCAGCAGCGTTGCCAGTTTGGGACTCTTCTAATAAGACTATTATGGCAGTTGTGGGGGTCACAACTGCTCTTTATAGTGTAGGACAGCTAATGAGGGAGCTAGTTGAGTTGCACAGTGGCCATATGTATTTGACTTCCCAAGAGGGTTATTTACTTGCAACTTCCACAAGTGCTCCTCTACTGGCAATTTCAACAAAGCCTCCTAAGCTTAAGATGGCTGTTGATTGTGAAGACGATATAATACGACAAGGAGCCCAGTGGTTACAGAGAACTTATGGGAACAATTTTCCTCCAAGTCATGAGGTTCATGTAGAGAATGTCAAGCTAGGCCACCAGAGATATTACATTGACTCATTCTTCCTAAACTTGAAGAGACTTCCTTTGGTAGGTGTCATCATCATACCAAGAAAGTATATCATGGGGCAGGTAGATGAAAGAGCCTTCAAAACGTTGGTTATTCTGATATCTGCATCTTTATGTATTTTAGTCATTGGATGTGTTTGCATTTTGATATTGACAAACGGAGTATCAAAGGAAATGAATCTAAGAGCAGAACTGATAAATCAACTGGAAGCAAGAAGAAAAGCTGAGGCATCGAGCAACTATAAAAGTCAATTCCTTGCAAACATGAGTCATGAACTGAGGACACCTATGGCAGCCGTAATTGGGTTGCTTGACATCCTTATATCTGATGACTGTCTCACAAATGAACAATATTCAACTGTTACTCAAATAAGAAAATGCTCAACTGCTCTGCTCCGTCTTCTTAACAACATCTTGGATCTGAGTAAGGTGGAATCGGGAAAACTGGTCCTAGAAGATGCAGAATTTGACTTGGGACGGGAACTTGAAGGGCTTGTAGATATGTTTTCTGTTCAGTGCATTAATCACAATGTGGAGACAGTTTTAGACCTGTCTGATGACATGCCAAAGGTAGTTCGGGGTGATTCTGCGAGGGTGGTTCAAATATTTGCAAATCTGATCAACAATTCAATCAAATTCACTCCATCGGGTCATATAATTCTGCGAGGATGGTGTGAAAACCCAAATTCTTCCATTGGTAGTCCAAATTTTCCTCTTTACCAGAAGAAATCACGGAGTTTACAAAAGTGCAGAGAGAGGCCAAATGCAAACCACGGTAAAAGAGCATCTATAAAAGATAACAAAGTAATACTTTGGTTTGAAATTGACGACACAGGCTGTGGTATTGAACCAAGCAAGTGGGATTCTGTATTTGAAAGTTTTGAGCAAGCTGATCCTTCGACTACACGACTGCATGGAGGCACTGGTCTAGGTCTTTGCATTGTGAGAAACTTGGTTAACAAGATGGGTGGAGACATCAGGGTTGTCAAAAAGGAGGGTCCTGGAACACTAATGCGATTATGCTTGCTTCTCAGTGTGCCAATGGATGTCACGGAACAACAGTGTGCAGTAGATTTGACAGACAATGGCTTAGTGGTACTGCTTGCACTGCATGGCAACATGGGTCGATTAATTACATCCAAGTGGCTAACGAAAAAGGGGGTGTGCACAATGGAAGCATCTGACTGGAACGGACTAACTCAAATTCTGAGGGAAATCTTTCATGCAAGAAGTTCAGTTCATAATAATAACTTTGATGTACACTATCCAGCAAAAGAGGAATTGAAGTCTAAACTACTCAACATACGAGATATGAGGAACCCCGTTTTTGTCATTGTTGTTGACGTCGGACTACTTGACTTGAGCACAGATATATGGAAAGAACAGCTTAACTTCCTTCACAGATACTTTGGTAGAGCCAAGTTCGTATGGATGCTAAATCATGACACCTCCAATTCCATAAAGATGGAGCTCCGACGGAAAGGGCATATACTTATGGTCAACAAACCCCTTTACAAAGCAAAAATGATTCATATCTTGGAAGCTGTCATAAAGGAGAGAAGTCTTGAGCTACAAAAGAAAAACATGACTGCTACAAGGGTCACAATGAAAGAGGGTGATTTTCACGAGTTTCTTGAGATTGATTCTACTCATTTTGATACTGCTAGCTCTGATGATTCTGACATATCTGAAATAGGTGGTTCTAATATTGCTGTTAGTGCTGATGGAGATAAACCAGTTGAGAAGCTAGTCAAATCTCATCCATCATCACCATACCGTATGAATGACTGCCTAGTTACATTAACAAATGAAAATGAATGTATGGAAGAACATAATTTGAGTAAAGAAGAATCTTCTAGCCCCAGCTCCAATTATGCCACTGAAGACAACCAACCTAAATCAGTGTCCCCCAAAGAATCATCATCCGATTCAACAGAACATCCAGATGAAGATTCTGAATGTGGGGAAACACATAAGGTCACCAGCTCAAGTAAAGCAGTAGATGGAAAGAAATCTCTTGAAGGCCTAAAAATTTTGCTAGCAGAAGATACACCAGTACTCCAAAGGGTTGCAACCATAATGCTCGAAAAGATGGGAGCAGATGTTATTGCTGTAGGTGATGGACAACAGGCAGTAGATGCTCTCAATTGCATGTTCACTGCTGAAGACTGTAGAAGGGAATCACTCCAGAAAGAAAGAAACACAAGACCTCAAACAGAGATTTTGACTTGCCGTCCATATGACTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGCTATGAGGCAACAAAAGCAATCAGGAAATCAGAAGTAGGAACAGGCTTGCACATTCCCATTGTTGCTCTTACAGCACATGCAATGTCATGTGATGAAGCCAAATGCCTGGAAGTGGGTATGGATGCTTACTTGACAAAGCCTATTGACTTCAAAATGATGGTGTCCACCATTCTTTCACTCACCAAAAGAACGTCTTGACTTCTCTCTCATAAGGCCCAAACTAACAAAGGGTTGGCTCAGGCGGCCTAGAAATGTATAGAAGCTTACCTGCATATAGGACAGGTTTGGACAGGTTTCTTTAGAAATATTTTTAGAAGAAAAAAATTAAAAAAAAAAAAAGCTTTTTCATAAGATTTTTAAAGGATGTAGAACTTTTTGTAAAACTAATTTTAGTTAAGAAATTGAAGTTATCTCATAGTTTTTTTAAATTGAGAGACTTTTAAAAATTAGCTTACAAAAGTTCTTACATCATTTAAAAAATATAAAAAAAAACTGTTT 4138 0.3987 MAENKDEIYSECSPGLTSSMGSRSRYLFHRLCGCATSWNKSNTPRSRRIFHRDVEKEEEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTTKSLNSLAYGLRYELLQRPVLRMWNILNSTAEITTAQVKLSQYVIRRHSNPATQAEQVELYEAMRAVTWALFASRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLSNYSMGASNSNEVNSVSKHQALDDKALRGNYSAIWYREPLDPVSGEKIGKANKIAPEDLINIAGLSQVPDGVASWHVAVSKFTDSPLLSAALPVWDSSNKTIMAVVGVTTALYSVGQLMRELVELHSGHMYLTSQEGYLLATSTSAPLLAISTKPPKLKMAVDCEDDIIRQGAQWLQRTYGNNFPPSHEVHVENVKLGHQRYYIDSFFLNLKRLPLVGVIIIPRKYIMGQVDERAFKTLVILISASLCILVIGCVCILILTNGVSKEMNLRAELINQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKVVRGDSARVVQIFANLINNSIKFTPSGHIILRGWCENPNSSIGSPNFPLYQKKSRSLQKCRERPNANHGKRASIKDNKVILWFEIDDTGCGIEPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGDIRVVKKEGPGTLMRLCLLLSVPMDVTEQQCAVDLTDNGLVVLLALHGNMGRLITSKWLTKKGVCTMEASDWNGLTQILREIFHARSSVHNNNFDVHYPAKEELKSKLLNIRDMRNPVFVIVVDVGLLDLSTDIWKEQLNFLHRYFGRAKFVWMLNHDTSNSIKMELRRKGHILMVNKPLYKAKMIHILEAVIKERSLELQKKNMTATRVTMKEGDFHEFLEIDSTHFDTASSDDSDISEIGGSNIAVSADGDKPVEKLVKSHPSSPYRMNDCLVTLTNENECMEEHNLSKEESSSPSSNYATEDNQPKSVSPKESSSDSTEHPDEDSECGETHKVTSSSKAVDGKKSLEGLKILLAEDTPVLQRVATIMLEKMGADVIAVGDGQQAVDALNCMFTAEDCRRESLQKERNTRPQTEILTCRPYDLILMDCQMPKMDGYEATKAIRKSEVGTGLHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKMMVSTILSLTKRTS 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03109 1248 SUPERFAMILY CheY-like 1096 1245 IPR011006 -
Pste1g03109 1248 ProSiteProfiles Response regulatory domain profile. 1099 1244 IPR001789 GO:0000160
Pste1g03109 1248 MobiDBLite consensus disorder prediction 1031 1089 - -
Pste1g03109 1248 Pfam Response regulator receiver domain 1100 1239 IPR001789 GO:0000160
Pste1g03109 1248 FunFam Histidine kinase 1-like protein 491 570 - -
Pste1g03109 1248 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 558 764 IPR036890 -
Pste1g03109 1248 PANTHER TWO-COMPONENT HISTIDINE KINASE 51 773 - -
Pste1g03109 1248 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 616 766 IPR003594 -
Pste1g03109 1248 Gene3D - 571 770 IPR036890 -
Pste1g03109 1248 SMART HKATPase_4 616 768 IPR003594 -
Pste1g03109 1248 SMART HisKA_10 503 569 IPR003661 GO:0000155|GO:0007165
Pste1g03109 1248 MobiDBLite consensus disorder prediction 1062 1080 - -
Pste1g03109 1248 MobiDBLite consensus disorder prediction 976 996 - -
Pste1g03109 1248 PRINTS Bacterial sensor protein C-terminal signature 693 707 IPR004358 GO:0016310|GO:0016772
Pste1g03109 1248 PRINTS Bacterial sensor protein C-terminal signature 711 721 IPR004358 GO:0016310|GO:0016772
Pste1g03109 1248 PRINTS Bacterial sensor protein C-terminal signature 728 746 IPR004358 GO:0016310|GO:0016772
Pste1g03109 1248 SMART REC_2 1098 1240 IPR001789 GO:0000160
Pste1g03109 1248 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 491 570 IPR036097 GO:0000155|GO:0007165
Pste1g03109 1248 CDD REC_hyHK_CKI1_RcsC-like 1100 1240 - -
Pste1g03109 1248 Gene3D - 1077 1246 - -
Pste1g03109 1248 CDD HisKA 504 565 IPR003661 GO:0000155|GO:0007165
Pste1g03109 1248 ProSiteProfiles Histidine kinase domain profile. 510 768 IPR005467 -
Pste1g03109 1248 MobiDBLite consensus disorder prediction 1039 1061 - -
Pste1g03109 1248 Pfam His Kinase A (phospho-acceptor) domain 504 569 IPR003661 GO:0000155|GO:0007165
Pste1g03109 1248 Gene3D - 491 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03109 Pste-Chr1 13998491 14006330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03109 18 1245 Histidine Kinase Gene Family AT2G17820 64.337 0.0 1574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste1g03109 HATPase_c 3.7e-22 CL0025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03109 1 13998491 14006330 Pste1g03109 1 13998491 14006330 ECH
Pste1g03109 1 13998491 14006330 Pste7g01736 7 16165516 16173074 PCT