Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1955 ATGGATGATGATGTGCTGAATATGCCCAATTGGGGTTACTATGAACCCTTCAAGGGTGGGAATCTCGGTCTGAATCTGATGCCTGATATTAATGATCGGGAAACCAAACCGTTTTTTCCTGGTCGTGATCCAGCTATGTTAGTCGGTGCGAATGGAAGTTTTCACCCTCGTGACAGTGCTGTTGTTGAGCCTCCTGCTCAGTTGAACTATGTCAGGGATAATTGGATGAATCCGAGACATAGGTTTTATAATATGCAGCTTTCGAATCCAAGTTATGCTGCTGTTCTTCCTGAAACATCGCAGGGACTCTCCTTGCCGTTTATCCAACCACTGGTGGATGCATCAAGAAACGAGAATGGGGATGGGATTGAAGAATTAGCTGTTAAGAAGGAAGGTGGCAAGTCGAAGAAAAGGAAGTCGAAGGGTGCTCTTGCCGTTCCAAAAGCTAAAAAAGCCAAGAAGGCAAAGGAGAACGGCAATAATTCAGCTCAGGGTGTGAAGCCACCAAAGAAGACTGTGGCGCTTGAAATAAATGGAATTGAAATGGACATTTCTGGTCTACCTGTTCCTGTTTGTTCATGCACCGGGAGTCCTCAGCAGAGTTATCGGTGGGGCTGTGGAGGTTGGCAATCAGCTTGCTGTACCACAAATGTGTCAATCTATCCTTTGCCGATGAGCGTCAAAAGGCGTGGCGCAAGGATAGCTGGGCGGAAAATGAGCCAAGGAGCTTTCAAAAAGGTTCTAGAAAAGCTTGCAGCTGAAGGTTATAATTTTGCTAACCCTATTGATCTGAAGACTCATTGGGCGAGACATGGCACCAACAAGTTTGTCACTATCAGATAG 843 0.4591 MDDDVLNMPNWGYYEPFKGGNLGLNLMPDINDRETKPFFPGRDPAMLVGANGSFHPRDSAVVEPPAQLNYVRDNWMNPRHRFYNMQLSNPSYAAVLPETSQGLSLPFIQPLVDASRNENGDGIEELAVKKEGGKSKKRKSKGALAVPKAKKAKKAKENGNNSAQGVKPPKKTVALEINGIEMDISGLPVPVCSCTGSPQQSYRWGCGGWQSACCTTNVSIYPLPMSVKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLKTHWARHGTNKFVTIR* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1955 280 MobiDBLite consensus disorder prediction 130 168 - -
Psa7g1955 280 SMART GAGA_bind_2 1 280 IPR010409 -
Psa7g1955 280 PANTHER BNAA06G09500D PROTEIN 1 280 - -
Psa7g1955 280 MobiDBLite consensus disorder prediction 133 149 - -
Psa7g1955 280 Pfam GAGA binding protein-like family 1 280 IPR010409 -
Psa7g1955 280 PANTHER - 1 280 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1955 Psa-Chr7 143253022 143255267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1955 1 280 BBR or BPC Transcription factor family AT2G01930 58.194 6.49e-107 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Psa7g1955 GAGA_bind 4.5e-96 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1955 7 143253022 143255267 Psa7g1955 7 143253022 143255267 ECH