LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa7g1954	ATGAGGGTTTGGAGACAAGCAACAGGAATTCTAAAAGACAAAAACAGCATTTGGAATGCAAAGTTTTCAAGAAAGGGTCCATGGCGTAATCCTGATCTTGAAACTGTTATAATAAAAGCAACAAGCCATGATGAAAACCGCATTGATTGTAAGAATGTGCAAAGAGTTTTCAAATGGTTAAGAACCTCTCCTTTGTATTTTAAGCCTCTTGTTTGGGCTCTATCCATTAGAATGCAAAAAACTAAGAGTTGGGTTGTGGCCCTTAAAGGTTTGATGCTCATTCATGGCGTTTTCTGCATTGGTATCCCTATGGTGCAAAAAATGGGTAGGTTACCATTTGATTTATCCAACTTCAATGATTCTTATTTGAACCCTTCAAAAGCTTGGGGTGTGAATTCTTTTGTTCGTTCTTATTTTGCTTATTTGGATCAACGATCGGCTTTTGTTTCCTTCGAGGTTAAGAATTTAAGGAAGAACAACAATAATAACAAAGGGGTGGAAGTTGAAGAGACATTAATGGAGGAGCTTGAGAAGTTGCAAAAGTTGCAAACAATGATTGACATGCTTTTGCAAATCAAACCAAAACATATGAATATGAGTGTTGGTCTTGTTCTTGAAGCGATGGATTGTGTCATAGTTGAGGTTTTTGATGTTTATAGTAAGTTTTGTAACAAGATTGCAGGGGTTTTGATGAGGATTTATGATGTTGGTGGGAAAACGGAAGCTTGTGTTGGTTTAAGGGTTTTGCAAAAAGCAATTGTTCAAGGGGATGAATTGGCTAGTTATATTGAGTATTGTAGGGATATTGGTGTTCTAAATGCTTCTCAATGTCCTAAGATTGAAAGAATTTCTGAAGAAGATATTCAAGATCTTGAGAGGATAATTAGTGGTGCTTATTATGCTAAGAAAAAAAACATGAAGGGTGTTAATGATGGTGTTGAAAATGAGAAGAATCAAGATAAGGCCATTGAGGCAAGAGATTACTTGCATCACAAGGAATCATCAGAGAATGGTTTGATAACAGTAGTTACTCATCAATGGGAGGTGTTTTTTGATGAGACATTTGTTGATGATGATGTTAAAGAAAATAATGTCATCAATGGTAAAAAGGGAAATAATGTCACAACAACCAATCCTTTTGAAGAATCATATAGCCTTGTACCTTACTGTCATGTTCATGTTAATCAAGTTCTTCCTGACCTAATTAGTTTGTAG	1215	0.3556	MRVWRQATGILKDKNSIWNAKFSRKGPWRNPDLETVIIKATSHDENRIDCKNVQRVFKWLRTSPLYFKPLVWALSIRMQKTKSWVVALKGLMLIHGVFCIGIPMVQKMGRLPFDLSNFNDSYLNPSKAWGVNSFVRSYFAYLDQRSAFVSFEVKNLRKNNNNNKGVEVEETLMEELEKLQKLQTMIDMLLQIKPKHMNMSVGLVLEAMDCVIVEVFDVYSKFCNKIAGVLMRIYDVGGKTEACVGLRVLQKAIVQGDELASYIEYCRDIGVLNASQCPKIERISEEDIQDLERIISGAYYAKKKNMKGVNDGVENEKNQDKAIEARDYLHHKESSENGLITVVTHQWEVFFDETFVDDDVKENNVINGKKGNNVTTTNPFEESYSLVPYCHVHVNQVLPDLISL*	405

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa7g1954	404	Gene3D	ANTH domain	157	315	IPR014712	GO:0005545\|GO:0030136\|GO:0030276\|GO:0048268
	Psa7g1954	404	PANTHER	OS08G0467300 PROTEIN	1	402	-	-
	Psa7g1954	404	CDD	ANTH_N_AP180_plant	33	148	-	-
	Psa7g1954	404	Pfam	ANTH domain	32	295	IPR011417	GO:0005543
	Psa7g1954	404	Gene3D	-	4	152	IPR008942	-
	Psa7g1954	404	PANTHER	CLATHRIN ASSEMBLY PROTEIN	1	402	IPR045192	GO:0048268\|GO:0072583
	Psa7g1954	404	SUPERFAMILY	ENTH/VHS domain	32	149	IPR008942	-
	Psa7g1954	404	SUPERFAMILY	GAT-like domain	174	296	-	-
	Psa7g1954	404	ProSiteProfiles	ENTH domain profile.	25	156	IPR013809	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa7g1954	Psa-Chr7	143245159	143246865	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa7g1954	7	143245159	143246865	Psa7g1954	7	143245159	143246865	ECH