Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1936 ATGATGACTCCAAACTTAAACTTGGAACCCGAAAATCCTTCCGAAGCGCCTCGCGATCTTGGCTCCATGACGCTTGACTTGACACTCAATATCAGTTCGAGTGATGGCGAGTTTAAGGCTTCAAGTGATGCTAGCAGTGAAGTGGGAGCTACTGCTGAAGCTCATGCTTCGCCGCCATCGGTAACTCCAAGGGTTTTCTCTTGTAATTACTGCAGGAGGAAATTCTTTAGCTCGCAAGCGTTAGGAGGTCATCAGAATGCTCACAAACGGGAGAGGACGATGGCTAAACGTGCAATGAGAATGGGAATGTTCACCGACAGGTACACAAGCCTAGCATCACTACCTCTTCATGGTTCGCCTTTTCGGTCCCTTGGCGTTGAAGCTCATGGTGCAATGCATCAAAGAGCACATATGCAACCGATTTCATCAGCAAGGGCTCCTGATATGAGAGCTGCTGCGAAATTCAATAGAAACCATTTCGGATCAGTTGTTTTTGCGGAAGATGACGATGTAGGTTTCTTTTGGCCGGGAAGTTTCAGACAGGTGGATCAGGGAGGTGGTATCGTTGTTGGAAATTCTAGTTTTGCTCCAATGGCACCTCCTCCACCACAAGCATCTACATCTCCTGATCTCACTTTGAAGCTATAA 648 0.4738 MMTPNLNLEPENPSEAPRDLGSMTLDLTLNISSSDGEFKASSDASSEVGATAEAHASPPSVTPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFTDRYTSLASLPLHGSPFRSLGVEAHGAMHQRAHMQPISSARAPDMRAAAKFNRNHFGSVVFAEDDDVGFFWPGSFRQVDQGGGIVVGNSSFAPMAPPPPQASTSPDLTLKL* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1936 215 MobiDBLite consensus disorder prediction 38 59 - -
Psa7g1936 215 MobiDBLite consensus disorder prediction 1 20 - -
Psa7g1936 215 PANTHER ZINC FINGER PROTEIN JAGGED 17 215 IPR045320 GO:0003700
Psa7g1936 215 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Psa7g1936 215 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Psa7g1936 215 MobiDBLite consensus disorder prediction 194 215 - -
Psa7g1936 215 Gene3D Classic Zinc Finger 41 111 - -
Psa7g1936 215 PANTHER ZINC FINGER PROTEIN 3-RELATED 17 215 - -
Psa7g1936 215 SUPERFAMILY beta-beta-alpha zinc fingers 63 94 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1936 Psa-Chr7 142040597 142043562 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1936 59 215 C2H2 Transcription Factor Family AT1G66140 45.503 9.29e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Psa7g1936 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1936 7 142040597 142043562 Psa7g1936 7 142040597 142043562 ECH