Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1935 TGCTTCCATTAAGTTACCTGCTGATTACACTGCTGGAGTTGTGGTTGCTTTTTATATGTCAAATGGTGACATATTCTATGTAGACAACATTCCAATACGAGAAGTCACGCGAACAGAATCGATGGGAGGAGATTTCCCCTCTAAGCCGATGACTCTATACGCGACAATATGGGATGCATCGGATTGGGCTACCAACGGTGGAAAGTATAGAGTAAATTACAAGTATGCACCTTACGTTGCTAAATTCTCCGACCTTGTCTTACACGGCTGTGCAGTCGATCCGATTGAGCACGTAGCCAGCTGTGACACTGCTCAAACTTCCGAGTCTATTCCTTCCCGTGTTACGCCACTACAAAGACTCAAAATGGAGAGTTTCAGAAAGAAGCACATGACATACTCTTACTGTTACGATAAAATCAGATACAAAGCTCCCCCGACGGAGTGTGCTATCAATCCTCAAGAAGCTGAACGACTAAGAAGATTCGACCCTGTCACATTCGGTAGCGGCCGACATCGTCATGGAAAACGACGCCATTCCAGCAGATCAAGCCAGACACAAGCTGATTCATTTTAA 574 0.4512 ASIKLPADYTAGVVVAFYMSNGDIFYVDNIPIREVTRTESMGGDFPSKPMTLYATIWDASDWATNGGKYRVNYKYAPYVAKFSDLVLHGCAVDPIEHVASCDTAQTSESIPSRVTPLQRLKMESFRKKHMTYSYCYDKIRYKAPPTECAINPQEAERLRRFDPVTFGSGRHRHGKRRHSSRSSQTQADSF* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1935 190 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED 1 24 - -
Psa7g1935 190 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 24 170 IPR044791 GO:0004553
Psa7g1935 190 Pfam Glycosyl hydrolases family 16 24 74 IPR000757 GO:0004553|GO:0005975
Psa7g1935 190 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED 24 170 - -
Psa7g1935 190 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 1 24 IPR044791 GO:0004553
Psa7g1935 190 MobiDBLite consensus disorder prediction 160 190 - -
Psa7g1935 190 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 112 148 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Psa7g1935 190 Gene3D - 24 148 - -
Psa7g1935 190 SUPERFAMILY Concanavalin A-like lectins/glucanases 1 152 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1935 Psa-Chr7 141844179 141845382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1935 24 189 Glycoside Hydrolase AT1G14720 63.473 4.92e-76 229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1935 7 141844179 141845382 Psa7g1935 7 141844179 141845382 ECH