Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0187 ATGGTTATTATGGTTGGCGGTGGTTTGAAGGCGGCGATGTTAATGTCGTCGTCGTTGAGTCACGTGCGTCCTCTAACATGCGCTTCGTCGTCGCGATTAGTGTCGCATCCACACGACCTTGTGAAATGGGTAAAAAGAGAAGGTGGTTTCGTTCACCGTGCGGTGAAGATAGCGCAACCCGATTCCGGTGGTTTAGGGTTAGGGTTAGGGTTAGTGGCTAAAGAAGAAATTCCGATTGGTACTGACCTAATTGTTCTTCCTCAGCATCTTCCTTTGCATTTCACGTCTTTTCATCAGGATCAGAAGAATGATGAGAACTCTGTTCTTCTTCAATTGAGCTCACATGTTCCTGATGAATTATGGGCAATGAAACTGGGTTTGAAGCTTCTCCATGAAAGGGCAAAACATGGATCTTTTTGGTGGCCATATATCAGTAATCTCCCAGAAACTTACACTCTTCCGATCTTCTTTCCTGGGGAAGATATCAAGAATTTGCAGTATGCTCCGATTCTTCACCAGGTAAACAAAAGATGCCGATTTCTTCTTGATTTTGAGAAACAAGTCAAGCGTGCGCTAGTTGGTGTTACACCAGATAAGCATCCTTTTGGTGGTCAAGAAGTAGATGCTTCGTCTCTGGGATGGGCAATGTCAGCAGTTTCATCTAGAGCATTCAAGTTACATGGTAACAAGAATTCAAATGGGATAAACTTTGATATACCGATGATGCTCCCTCTAATTGACATGTGTAATCATAGTTTCAATCCAAATGCTAGAATTGTTCAGGAGCAAGAAACTGGTAGCACAGACATGCGTGTGAAGGTTGTGGCTGAGAAAGTCATCAGGGAAGATGATCCTTTATTACTCTGCTACGGATGTTTAAACAATGATCTTTTCCTTCTTGATTACGGATTCGTGATACAATCAAACCCTTATGACTGTATCGAGCTCAGATATGATGGTGCTCTTTTGGAGGCGGCAAGCACGGCAGCTGGAGTTTCTTCACCAAATTTCTCCACACCTGCTCCATGGCAGGAACTTATTTTATCACAGCTGAATCTAGCTGGAGAAGCTCCTGATCTCAAGGTGAGCATAGGTGGTCAAGAAATAATCGAAGGTCGTTTATTGGCCGCACTGAGAGTCCTCCTTGCAAGTGATATGGAAACTGTACAAAAGTATGACCTCAGCACACTCAAGTCTGTAGATGCTGAGGCTCCACTTGGTGTTGCGATTGACATTGCTGTATTTCGTACTTTGATCGCTCTATGTGTCGTTGCATTGGGACACTTTCCCACCAAATTAATGGATGATGAATCCTTATTGAAGCAGGGTGCTTCTGGTTCAACAGAGTTAGCCATTCATTTCAGAATCCAAAAGAAATCTATAATTATAGATGTGATGAAAAACCTTGCTAGGAAGGTAAAGGTTCTTTCATCAAATGAGACAGCTACTGCTGAAGGCTAA 1461 0.4298 MVIMVGGGLKAAMLMSSSLSHVRPLTCASSSRLVSHPHDLVKWVKREGGFVHRAVKIAQPDSGGLGLGLGLVAKEEIPIGTDLIVLPQHLPLHFTSFHQDQKNDENSVLLQLSSHVPDELWAMKLGLKLLHERAKHGSFWWPYISNLPETYTLPIFFPGEDIKNLQYAPILHQVNKRCRFLLDFEKQVKRALVGVTPDKHPFGGQEVDASSLGWAMSAVSSRAFKLHGNKNSNGINFDIPMMLPLIDMCNHSFNPNARIVQEQETGSTDMRVKVVAEKVIREDDPLLLCYGCLNNDLFLLDYGFVIQSNPYDCIELRYDGALLEAASTAAGVSSPNFSTPAPWQELILSQLNLAGEAPDLKVSIGGQEIIEGRLLAALRVLLASDMETVQKYDLSTLKSVDAEAPLGVAIDIAVFRTLIALCVVALGHFPTKLMDDESLLKQGASGSTELAIHFRIQKKSIIIDVMKNLARKVKVLSSNETATAEG* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0187 486 Pfam SET domain 68 291 IPR001214 GO:0005515
Psa7g0187 486 Pfam Rubisco LSMT substrate-binding 341 462 IPR015353 -
Psa7g0187 486 Gene3D set domain protein methyltransferase, domain 1 10 304 - -
Psa7g0187 486 ProSiteProfiles SET domain profile. 53 291 IPR001214 GO:0005515
Psa7g0187 486 SMART set_7 53 297 IPR001214 GO:0005515
Psa7g0187 486 SUPERFAMILY SET domain 38 309 IPR046341 -
Psa7g0187 486 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 301 480 IPR036464 -
Psa7g0187 486 Gene3D - 342 483 IPR036464 -
Psa7g0187 486 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 16 483 - -
Psa7g0187 486 PANTHER F21J9.27 16 483 - -
Psa7g0187 486 CDD SET_LSMT 72 305 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Psa7g0187 SET 3.6e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0187 7 13315273 13323403 Psa7g0187 7 13315273 13323403 ECH