Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0180 ATGTCATCATCAAACTACGCTCAGTCTCACGCGCCACTTCTTCGCCCACGCCGCGTGGGCCGCACGCCCGTCCTCGCGCTCCTTCTCGGACGCCGCGGACCTTCCGTTCTCGTTCGTGAAACCGCAGCACGCGAACTCGAAGAGCGGCGCGCCGACTGGGGTTACTCGAAGCCGGTGGTAGTGCTTGATGTGACGTGGAACACGGCCTTCGTCGTGGTCGCGGCGGTTATGTTAGCTTGCTCTGTTGAGGAGAATCCTAACACGCCGATTCGGTTGTGGATCTGTGGATACGCAGTGCAGTGTCTGGTCCACGTGGCGTTGGTGTGGTTGGAGTACAGAAGGAGGAACGGGGTTGGAGGACGAAGGGATGAGGAATCTCTTGATGAAGATGTTAACGATAGCGAGGATGATGACGATGTTGAATTTCGGAATTCTTCTCGCTCCGGATTTGCAAAACGATGTGCATCGTTGAATACCATGCTTTCATTGATTTGGTGGATGGTGGGCTTTTACTGGGTTGTCTATGGTGGTGATATTCTAATGCAAGATGCTCCACGGTTGTACTGGTTGGCCGTTGTCTTTTTAGCATTTGATGTCTTCTTTGCCGTCTTTTGTGTTGCTTTGGCCTGCTTAATTGGCATTGCCCTCTGCTGCTGTTTACCCTGTATTATTGGTATTCTTTACGCAGTTGCGGGACTGGAGGGTGCATCTGAATCAGATCTCAGTATACTTCCAAAATTTAAGTTTCATGCGGCAAGTGATGAGGAAACACCTAGTCTGAAAGGTGGATCAATGGTTCCCATTGAAAATAGTAGTGGTGCAAATGAACGAGTACTTTCACCGGAGGATGCGGAATGCTGTATATGCATCTCTCCTTACGAGGATGAAGCCGAGCTTCACGCACTTCCTTGTAACCACCATTTTCATTCCACATGCATAGTGAAATGGTTAAAGATAAATGCAACTTGTCCTCTTTGCAAGTTCAATATTCTAAAGGGAAATGAACAGGTGTGA 1014 0.4921 MSSSNYAQSHAPLLRPRRVGRTPVLALLLGRRGPSVLVRETAARELEERRADWGYSKPVVVLDVTWNTAFVVVAAVMLACSVEENPNTPIRLWICGYAVQCLVHVALVWLEYRRRNGVGGRRDEESLDEDVNDSEDDDDVEFRNSSRSGFAKRCASLNTMLSLIWWMVGFYWVVYGGDILMQDAPRLYWLAVVFLAFDVFFAVFCVALACLIGIALCCCLPCIIGILYAVAGLEGASESDLSILPKFKFHAASDEETPSLKGGSMVPIENSSGANERVLSPEDAECCICISPYEDEAELHALPCNHHFHSTCIVKWLKINATCPLCKFNILKGNEQV* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0180 337 Pfam Ring finger domain 285 327 IPR001841 -
Psa7g0180 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 335 IPR013083 -
Psa7g0180 337 ProSiteProfiles Zinc finger RING-type profile. 286 327 IPR001841 -
Psa7g0180 337 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 337 - -
Psa7g0180 337 SMART ring_2 286 326 IPR001841 -
Psa7g0180 337 SUPERFAMILY RING/U-box 276 331 - -
Psa7g0180 337 PANTHER TARGET OF ERK KINASE MPK-1 6 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0180 Psa-Chr7 12863403 12868532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0180 3 336 C3H Transcription Factor Family AT1G68070 65.789 7.12e-164 459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0180 7 12863403 12868532 Psa7g0180 7 12863403 12868532 ECH