Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0174 ATGAACATGATGAAGAATGAACAAGAAAACCGAGTTGTTGATGAAGAAGATGAAAGTGAACTTCCATTGAAACCAGAGTTTTTCTTGTACCCAACAACTCCAACTTCCTTTGTTGTTTCAGATGCACTTGAATCTGATTTTCCAATCATTTATGTCAACAAAGTGTTTGAAATTTCAACTGGGTATCGTGCTCATGAAGCCCTTGGTCGTAACTGCCGGTTCTTACAGTATAGAGATCCTCGAGCTCAGAGGCGGCATCCTTTGGTGGATCCGGTTGTGGTGTCGGAGATTAGAAGATGTCTTGAGGACGGTATTGAGTTCCAAGGTGAACTTCTGAATTTCAGGAAGGATGGTACTCCTTTGGTGAATAGACTCAGGCTTACACCGATTCATGATGACGATGGAATTGTGACACATGTGATAGGTATTCAAATCTATTCGGAGGCGAACCTTGATCTTAACCATATTTCGTATCCGGTTTATAGAGAGACTTGTATTCAAGATTTTGATAAAAATAGTAAATATTCTCCCAAGAGTGGAAGATTATTGTACAGTCCGCAGCAGCAGCAGCGCCGAGAGATGTGTGGTATTCTTCAGCTTTCTGATGAAGTATTGGCGCATAATATTTTATCGCGGTTGACACCGAGGGATGTTGCGTCGATCGGTTCTGTTTGCAGGAGGATACGCTTATTAACGAAGAACGAGCATGTTAGGAAGATGGTTTGTCAAAATGCTTGGGGAAAAGAAGTGACGGGTACATTGGAACTGATGACCAAGAAGTTAGGATGGGGTCGATTATCTCGAGAGCTTACTACTCTCGAGGCAGTTTGTTGGAAGAAAGTGACAGTTGGAGGCGGAGTCGAGCCTTCCCGTTGCAATTTCAGCACTTGTGCTGCAGGAAATAGGCTTGTATTGTTTGGAGGTGAAGGAGTTGATATGCAGCCTATGGATGATACTTTTGTTCTAAACCTCGACGCTAAAAATCCAGAATGGGAAAGGGTTATCGTGAAAGCATCCCCGCCCGGACGGTGGGGTCACACGATATCTTGTTTAAATAGTTCTTGGCTAGTGGTTTTCGGTGGATGCGGTAGGCAAGGTTTGCTCAATGATGTGTTTGTGCTTGACTTGGATGCTCAACAACCAACATGGAAGGAAGTCTTCGGCGGAGCACCACCTCTTCCGAGATCATGGCACAGTTCTTGCACAATTGAAGGCTCCAAATTGGTGGTCTCGGGCGGTTGCACGGATGCCGGAGTGCTTCTTAGCGACACGTATTTACTTGATCTAACAATAGACAATCCTACATGGAGAGAAATTCCAACTCCATGGACTCCGCCTTCTAGGTTAGGACACTCGCTCTCGGTCTATGGTAGGACAAAGATTCTCATGTTTGGTGGACTTGCCAAGAGTGGACACTTAAGGTTAAGATCAGGTGATGCTTATACAATTGATTTAGAAGCTGAACAACCACAATGGAGGCAACTAGAATGTAGTGCGTTCACCGGTTTAGCGAATCAAAACGCTGTTGTACCTCCTCCTAGACTAGATCATGTTGCTGTAAGCATGCCTTGTGGGAGGGTCATTATATTTGGAGGTTCCATTGCAGGTCTTCACTCGCCGTCTCAGCTATTTCTATTGGACCCTTCAGAAGAGAAACCGTCATGGAGGATCCTCAATGTTCCGGGGCAACCACCTAAGTTTGCTTGGGGTCATAGCACTTGTGTGGTTGGAGGGACTAGGGTTTTGGTGTTGGGTGGACATACCGGTGAGGAATGGGTACTCAACGAGTTGCACGAGTTATGCCTGGCAAGTCGACAGGACTCCGACATGTAA 1833 0.4539 MNMMKNEQENRVVDEEDESELPLKPEFFLYPTTPTSFVVSDALESDFPIIYVNKVFEISTGYRAHEALGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEDGIEFQGELLNFRKDGTPLVNRLRLTPIHDDDGIVTHVIGIQIYSEANLDLNHISYPVYRETCIQDFDKNSKYSPKSGRLLYSPQQQQRREMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRLLTKNEHVRKMVCQNAWGKEVTGTLELMTKKLGWGRLSRELTTLEAVCWKKVTVGGGVEPSRCNFSTCAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWERVIVKASPPGRWGHTISCLNSSWLVVFGGCGRQGLLNDVFVLDLDAQQPTWKEVFGGAPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDNPTWREIPTPWTPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGDAYTIDLEAEQPQWRQLECSAFTGLANQNAVVPPPRLDHVAVSMPCGRVIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASRQDSDM* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0174 610 Pfam Kelch motif 515 562 IPR011498 GO:0005515
Psa7g0174 610 PANTHER ADAGIO PROTEIN 3 12 608 - -
Psa7g0174 610 Gene3D - 472 605 IPR015915 GO:0005515
Psa7g0174 610 TIGRFAM sensory_box: PAS domain S-box protein 46 143 IPR000014 -
Psa7g0174 610 Gene3D PAS domain 29 155 - -
Psa7g0174 610 Pfam PAS domain 43 144 IPR000014 -
Psa7g0174 610 Gene3D - 267 471 IPR015915 GO:0005515
Psa7g0174 610 Pfam Galactose oxidase, central domain 291 341 - -
Psa7g0174 610 SUPERFAMILY PYP-like sensor domain (PAS domain) 37 144 IPR035965 -
Psa7g0174 610 SUPERFAMILY F-box domain 193 272 IPR036047 GO:0005515
Psa7g0174 610 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 12 608 - -
Psa7g0174 610 CDD PAS 33 143 IPR000014 -
Psa7g0174 610 Pfam Galactose oxidase, central domain 405 456 - -
Psa7g0174 610 Pfam Galactose oxidase, central domain 356 403 - -
Psa7g0174 610 SUPERFAMILY Galactose oxidase, central domain 278 595 IPR011043 -
Psa7g0174 610 SMART pac_2 108 149 IPR001610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0174 Psa-Chr7 12662520 12665332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0174 32 145 AGC Kinase Gene Family AT5G58140 43.860 4.40e-21 96.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0174 7 12662520 12665332 Psa7g0174 7 12662520 12665332 ECH