Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0156 ATGACATCTTTTGAGCAATATGGACTTCCTCAACAATTTCCTACCAATCTTAGGGTTCTTGTAATAGATCATGACATCAGTCTTCTTAATGTTATTGAAAAAACTTGTTTTCAATTCCATTACCAAGTTAAGACATGCTCTAAAGTTTCAGATGCCTTGGATTTTTTGAGAAAAACAAATAATTGTTTTGATATGATACTAATCGAAGCTCAAATGTTTGACATGGATTCGTACGAATTTGTGCGATATGTCACACAAGAAATCAAAATTCCGGCTATTATGATGTGTGTTGATGGATCAACAAATGCAGTGATGAAGAGTATTATAAATGGAGCTTCTGATTATTGGATCAAACCTTTGAATGAGAATCAAATCAAGAATATGTGGCAACATGTTGCAAGAAATTTTTTGAATGAAAATAAAAAACAAGAAGTTGATCCGGAAAATTTAAATGTAGAAAGCAACATTATACAAGAAGATGTTGAAATCGATAAAGATAACCATGAATTGCGAACGGAGAAGTCGCGTCTAGCGTGGTCACCAGAATTGCATAAAAAATTTGTTAACGCTGTTACAGAACTCGGCATTGATAGGGCTGTACCAAAGAAAATTCAAGAATTAATGAATGTTGATGGATTGACTAGAGGACATATTGCTAGTCATTTGCAGAAATATAGACAATATTTGAAGAGAGAAAATCTAGAGAAACATATTAGAATGACTCAAAATATTATGGAATCCAACAATTCATTTGGATATTCTTCAGGATTTAATTATCATGCTTATGGTGGTGCTTCTTCTTCTACTCATCATGGTGTTCCTCTTGAAATGCAAAACCACGAGCAAAACCAAAATGCATTATTCAAATCATCATCATCATTATGGCATAACAATAATTCTCATATGGAACAAGTTCCCAACAGTATGATATGGCAGCAACCTCAAGAATATGGAACATGGCAACAAGTTCCTATGTCATCGTTGACAACTGGTGCTTTAAGTTCTTCTCCTGGTTTTTCACCTTTTTCTGCTGATGTTAATATAGGAGGAGTCTCCGCCAGTGCTACTGTTGTTGAAGATGATGGTACCTCAACAAGGGTGGAGAATGAGGCGGAGTTGAATTCTATCTATCATTCACTAGAGACTCATCTATTATCTTGA 1161 0.3454 MTSFEQYGLPQQFPTNLRVLVIDHDISLLNVIEKTCFQFHYQVKTCSKVSDALDFLRKTNNCFDMILIEAQMFDMDSYEFVRYVTQEIKIPAIMMCVDGSTNAVMKSIINGASDYWIKPLNENQIKNMWQHVARNFLNENKKQEVDPENLNVESNIIQEDVEIDKDNHELRTEKSRLAWSPELHKKFVNAVTELGIDRAVPKKIQELMNVDGLTRGHIASHLQKYRQYLKRENLEKHIRMTQNIMESNNSFGYSSGFNYHAYGGASSSTHHGVPLEMQNHEQNQNALFKSSSSLWHNNNSHMEQVPNSMIWQQPQEYGTWQQVPMSSLTTGALSSSPGFSPFSADVNIGGVSASATVVEDDGTSTRVENEAELNSIYHSLETHLLS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0156 386 CDD REC_typeB_ARR-like 19 133 - -
Psa7g0156 386 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 13 315 - -
Psa7g0156 386 SMART REC_2 17 129 IPR001789 GO:0000160
Psa7g0156 386 SUPERFAMILY CheY-like 15 141 IPR011006 -
Psa7g0156 386 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 315 IPR045279 GO:0009736
Psa7g0156 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 171 230 IPR017930 -
Psa7g0156 386 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
Psa7g0156 386 Gene3D - 11 139 - -
Psa7g0156 386 Gene3D - 171 232 - -
Psa7g0156 386 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 174 227 IPR006447 GO:0003677
Psa7g0156 386 Pfam Myb-like DNA-binding domain 177 226 IPR001005 -
Psa7g0156 386 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160
Psa7g0156 386 SUPERFAMILY Homeodomain-like 172 231 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0156 Psa-Chr7 11670790 11672436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0156 1 341 Response Regulator Gene Family AT4G31920 30.729 3.54e-49 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Psa7g0156 Response_reg 7e-11 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0156 7 11670790 11672436 Psa7g0156 7 11670790 11672436 ECH