Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0106 CTTCGTCAGACAACTCAATATCTATGGTTTCAGGAAAATTGATACGGATAATTGGGAATTTGCCAATGAAAACTTCATTAGGGGTAAAAAGCATTTGTTGAAGAATATACGTAGAAGGAAACTTCCACATGTTACCGATCAGCAAAAAGCATTGCCGCAGAAAAACAATTCTGATAAACCGTCACTAGAAGCGATTAAATCTAGCCTGTGGAAACAAGTGGAGAATCTCAAATCGGATAGAAAAACCCTGACACAGGAGTTGGTTAAACATAAGCACCTTGAATCCTCTGAGAGTAAGTTGCTTCTATTGAGTGATCGTCTGGATGGAATGGAGAAGCATCAACAGCAGATGCTATCGTTCTTGGTCATGGTCGTACAATGCCCCGGATTCCTGGATCAGTTGCTTCACCCTAAGGAAAATAACTGGCATTTTGCAGAAGAAGGGAATATGTGGGACCACAGTAGCCGAGATAACGAACCATTTCCTTCTGATGGAATGATTCCTGTAGTTCCGCTATCTTTTGCCTTTGAACCAGAACCTGAACTTTCTGCAGACGGGATGAAAGACTTGTGCATCAGTCCGGAGTTCTTGAAATTGCGCCTAGATGAAAAGTTATCTCCATTAGATAACCATTCTCCGTTTCTCGTACCGGATTTACCTGATGATGGTTCGTGGGAAAAACGTTTTTTGGGCAGTCCTTTTCCCGAAAACGTTGAAGATATTGATCATGAAAATGAGAGGCACAATGTTAGTGAATTGGAGATGGAACCTATCACGGAAACTTCAAATGAAAGATCTGCTTTTGAAGAAATGATTGTAGAAATGGAGAAAACTCAAGCATGA 844 0.4088 FVRQLNIYGFRKIDTDNWEFANENFIRGKKHLLKNIRRRKLPHVTDQQKALPQKNNSDKPSLEAIKSSLWKQVENLKSDRKTLTQELVKHKHLESSESKLLLLSDRLDGMEKHQQQMLSFLVMVVQCPGFLDQLLHPKENNWHFAEEGNMWDHSSRDNEPFPSDGMIPVVPLSFAFEPEPELSADGMKDLCISPEFLKLRLDEKLSPLDNHSPFLVPDLPDDGSWEKRFLGSPFPENVEDIDHENERHNVSELEMEPITETSNERSAFEEMIVEMEKTQA* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0106 280 Coils Coil 73 93 - -
Psa7g0106 280 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 263 IPR027725 -
Psa7g0106 280 MobiDBLite consensus disorder prediction 43 62 - -
Psa7g0106 280 Pfam HSF-type DNA-binding 1 39 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa7g0106 280 SMART hsfneu3 1 39 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa7g0106 280 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-8 1 263 - -
Psa7g0106 280 Gene3D - 1 40 IPR036388 -
Psa7g0106 280 SUPERFAMILY "Winged helix" DNA-binding domain 1 39 IPR036390 -
Psa7g0106 280 MobiDBLite consensus disorder prediction 48 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0106 Psa-Chr7 7390075 7391236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0106 1 233 HSF AT1G67970 43.568 5.25e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Psa7g0106 HSF_DNA-bind 6.2e-10 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0106 7 7390075 7391236 Psa7g0106 7 7390075 7391236 ECH