Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2350 ATGGCCCAATCTTTGCTATTCACGATGAAGAGGCGTGCCATTCAATCAAATATACACCATCTCCACTTTCAATACTTGCATATACCATACCATCTAAAACCATTATCAAGTATTGCCCAATCTGTGCTATTCACAGTGAAGAAGCCTGCCGCTGGATTGGTCACTCCATCCAATATACACCATCAAAAACCATTATCCATTATGGCCCAATCTCTCATATTCCCCGTCAAGAAGCATGCTCCTGAGTTAGTTACTCCATCGAAACCAACACCTCATGAAGTAAAATTACTATCCGACATTGATGACCAAGATGTGTTACGTTTACATATTCCACTGATACAATTTTATAACTACGATCCAAATATGAAAGGAAAAGACCCTGTTGATATAATTAAAAAAGCACTTGCGAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGGTTGAGAGAAGGTCCTAGTAGAAAACTTATGGTAGATTGTAATGAAGAAGGTGTTTTATTCATTGAAGCTGATGCTGATGTTACTCTTAAAGAATTTGGTGATGTTCTTCTTCCTCTTTTTCCTTGCTTGGATGAGCTTCTTTATGATGTTCCTGGTTCTTCAAACATTATCAACGCTCCATTGATCCTTATTCAGGTAACACGTCTCAAGTGCGGTGGTTTCATATTTGCTATTCGTATAAACCATACAATGAGTGATGCATTTGGTATAGCTCAATTCATGAATGCCTTAGCAGAAATATGTCGTGGAATGAATGAACCTTCAATCTCACCGGTGTGGCGCAGAGAACTTCTAAGCGCAAGGAACCCACCAAGAGTGACATGTTATCATCCCGAACTCGAACAAGCACCAGATAACAAAGGAATCGTTAATGTCATACCCTTAGACAACATGGCCCGACGAACTTTCTTCTTCGGCCCCATAGAGGTAGCCACAATTCGCTCTCTCCTTCCAACCGACGAACAACAACAATGCTCCAAATTTGAAATCATCACCGCTTTCCTTTGGCGTTATCGTACAATAGCGTTACAGCTAGATTCAAACGAAGAAGTCTGTATGTATTTTGCAGTCAATGGACGTAGCAAATTTGTTGACCTACAATTACCGAATGGTTACTATGGTAACGTTATTGCAAGTCCTGCTATTGTTACAACTGCGGGAAAATTAATTGAAAATCCATTGGGGTATGCATTGAACTTAGTTAAGAAATCAAAAGCTAAAGTGACCAAAGAATATATGCATTCATTGGCAGATTTAATTGTTATCAAGAGTCGACCTCTGTCTACTACGACGGAACTTATGTTTATAGTGTCTGATACTACACGTTTAGGATTTAGAGATGTTGATTTTGGTTGGGGAAAAGCTGTTTATGGAGGACCAGCTATGGATCCTCCTTTTCCTGGTATTGCTAGCTTTTATATACCTTTTACAAATGCTAAAGGAGAAGAAGGTTTTGTTGTCCCACTTTGTTTGCCAGAACAAGCCATGGAGAGATTTGTAATAGATCTTGATAGTGTGCTTAAGGGAAACAGTAACCAATCTGCAAACGGTGATACAAATTAA 1566 0.3895 MAQSLLFTMKRRAIQSNIHHLHFQYLHIPYHLKPLSSIAQSVLFTVKKPAAGLVTPSNIHHQKPLSIMAQSLIFPVKKHAPELVTPSKPTPHEVKLLSDIDDQDVLRLHIPLIQFYNYDPNMKGKDPVDIIKKALAKTLVFYYPFAGRLREGPSRKLMVDCNEEGVLFIEADADVTLKEFGDVLLPLFPCLDELLYDVPGSSNIINAPLILIQVTRLKCGGFIFAIRINHTMSDAFGIAQFMNALAEICRGMNEPSISPVWRRELLSARNPPRVTCYHPELEQAPDNKGIVNVIPLDNMARRTFFFGPIEVATIRSLLPTDEQQQCSKFEIITAFLWRYRTIALQLDSNEEVCMYFAVNGRSKFVDLQLPNGYYGNVIASPAIVTTAGKLIENPLGYALNLVKKSKAKVTKEYMHSLADLIVIKSRPLSTTTELMFIVSDTTRLGFRDVDFGWGKAVYGGPAMDPPFPGIASFYIPFTNAKGEEGFVVPLCLPEQAMERFVIDLDSVLKGNSNQSANGDTN* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2350 521 Gene3D - 293 502 IPR023213 -
Psa6g2350 521 Gene3D - 75 283 IPR023213 -
Psa6g2350 521 PANTHER ALCOHOL ACYLTRANSFERASE 75 510 - -
Psa6g2350 521 Pfam Transferase family 75 501 - -
Psa6g2350 521 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 75 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2350 Psa-Chr6 169499395 169501323 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2350 83 500 Monolignol Biosynthesis Gene Families AT5G48930 30.556 5.07e-53 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2350 6 169499395 169501323 Psa6g2350 6 169499395 169501323 ECH