Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2308 ATGCCTGCAAAACTAGTAGAAGTTATGTGGCCTGCATTAGTTGCTAATAAGATACTCCATAAGAGACTTGGAAGCAGAAATTTTGTAGCAGATTATCAAAGTTATACAGATCCTTTATTAGGTATCACAAGTGATGATCAGTTATCTATTACCACCAATTCCATTCTTAATGATCATCGCGATACCGAAAAGTACAAGGTTTTTGTGAGTACATGGAACATAGGTGGAATTGCACCAGATGAAGGATTGAATATTGAGGATTTGTTGGAGACATGCAGCAAGTCATTCGATATCTATGTATTCGGGTTTCAAGAAATTGTGCCACTAAAAGCATCGAATGTATTGGGATCAGAAGATAACAAGATATCAACAAAATGGAATTCTTTAATAAGAGAAGCTTTAAACAAGAGAACACATCACTACTGTTGCAAAGATATTGAAAGTGATGATGATAATATAAAGCAAGATTTGAAAGGAAATATTCCAGGTCAGCAGTGCAAATCAGCCTCACAAGATTTTCATTGTATCATTAGCAAGCAAATGGTTGGTATAATGATATCTGTGTGGGTTAGAAGTGACCTTAGTCCATTCATAAGACATCCATGTGTCTCTTGTGTTGGTTGTGGCATCATGGGTTGCTTAGGCAACAAGGGTTCAGTATCTGTGAGATTTCTGTTACATGAAACAAGCTTCTGCTTTGTATGCAGCCATCTAGCTTCTGGTGGAAAGGAAGGAGATGAGAAGCACAGAAATTCCAACGTTGCTGAAATATTTTCTAGGACAAGTTTTCCTAAAGGCACTCTTTTGGATTTACCAAGAAAGATTCTTGATCATGATCATGTAATATTGCTTGGAGATTTAAATTATAGAATTTCTATGCCGGAAGAAACTACACGTTTATTGGTTGAAAAAAGAGACTGGGATTCCCTATTAGAAAATGATCAGCTAAAGATGGAGCTAGTGAATGGACACATTTTAAGAGGTTGGCATGAAGGGACAATCAAATTTGCTCCAACCTACAAGTATTTTCCAAATTCAGATTTGTACTATGGATGTTGTTATCATGGAAGCAAAAAAGCAGCAAAGAAAAGATCACCAGCATGGTGTGATAGAGTTATATGGTTTGGCAATGGTTTAAAGCAAATTGAGTATTCAAGAAGTGAATCAAAGTTATCGGATCATAGGCCTGTTAAGGCATTGTTTACAGCTGAAGTAAAGGTTTCATCATCATTCAAAAACTTGTCAAGTTTGTTTATGTCGGAAAGATTTGAACAAATTAAAAATGTATTTCAAGTTTCTCCCGAGTTTGCATGTAAAAAACAATCAAGTTTTCGTTTGTAA 1341 0.3565 MPAKLVEVMWPALVANKILHKRLGSRNFVADYQSYTDPLLGITSDDQLSITTNSILNDHRDTEKYKVFVSTWNIGGIAPDEGLNIEDLLETCSKSFDIYVFGFQEIVPLKASNVLGSEDNKISTKWNSLIREALNKRTHHYCCKDIESDDDNIKQDLKGNIPGQQCKSASQDFHCIISKQMVGIMISVWVRSDLSPFIRHPCVSCVGCGIMGCLGNKGSVSVRFLLHETSFCFVCSHLASGGKEGDEKHRNSNVAEIFSRTSFPKGTLLDLPRKILDHDHVILLGDLNYRISMPEETTRLLVEKRDWDSLLENDQLKMELVNGHILRGWHEGTIKFAPTYKYFPNSDLYYGCCYHGSKKAAKKRSPAWCDRVIWFGNGLKQIEYSRSESKLSDHRPVKALFTAEVKVSSSFKNLSSLFMSERFEQIKNVFQVSPEFACKKQSSFRL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2308 446 SMART i5p_5 63 409 IPR000300 GO:0016791|GO:0046856
Psa6g2308 446 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 13 425 IPR045849 GO:0004445|GO:0046855
Psa6g2308 446 Pfam Endonuclease/Exonuclease/phosphatase family 71 394 IPR005135 GO:0003824
Psa6g2308 446 Gene3D Endonuclease/exonuclease/phosphatase 45 431 IPR036691 -
Psa6g2308 446 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 13 425 - -
Psa6g2308 446 SUPERFAMILY DNase I-like 62 406 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2308 Psa-Chr6 166112710 166116273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2308 63 405 Acyl Lipid Metabolism Gene Families AT1G65580 26.020 1.88e-31 125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2308 6 166112710 166116273 Psa6g2308 6 166112710 166116273 ECH