Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1197 ATGTGTAAGACAATTCAATTAGATGGATTCCCATCCAATCTTTCTGCTAAAGAGGTAATGAAATTTTTAGAGCAACATACTGGCTTTCAAACTGTTCTTGCTGTAATCATTGAGAAGCACAATGATTCTATGACACATGTTAATGTTCAATTCACAGACAAAAAATGTGTTGAAACAATCTTAAACTTGGTTATTAAACAACACCTATGTTTCAATGACACTGTTCTAAATGCTGAAGTAACAAAATCTGACATTTTGCCAAAGCCAAGGATCTTTGCTTATAGCATGGATGGTGTTGGAGTGCACTTTGGATGTCAAACATCTAAAGAAAAACTTAGTGTACTTTGGGAACATTCAAATGCTTCTGTTAAATTTGGATCCAGATTAGGAAAATTGTATATCTTTTTTAGCTATTTGTCTAAGGATTATAAGCTGCAGATTAATTCCGAGAGTATATCGCGGATTGAGCTGCATCATTCGCATTGTCATACGAAGAATCTTCTCCTTTTTCAGTTACGCAGTGCTCCTGGAATCTACGAAAAGTTTGTGTCCGAAATGAAGTATTTTAAGGAAGATCATGACAACCATTGGACTAGAAGTGTAGATTTCACCTCATCATGTTGCATTGGACAATCATCAGCTTTATGTTTCGAGCTTCTGCAGAATGTTGAGGTTCCGAATTTTCGTCCCTTCTATCGAAATTATTATAAGTTTGACAACACCTTTGATCTTGAGAAACAACATGGTTTCTCGTCGAATTTGAATTTTGTCCCTATGGTGATTCCACCAGAAGGATTCAACTTGCCATACAAAATTTTGTTCAAAATCAACTCATTAGTCCAACATGGTTGCCTTCCTTTGCAAGTAATTGACGCCGATTTTTTTCGTATGGTTGATCCAGAAAGAATGAAATTTGAATATATAGAGAGTGCTTTGAATAAATTACATGTGATGAAAGAATGTTGCTATGAACCTGTTCAATGGTTGGAGGAACAATATCGAAGATACTCGAAAAATAGTTCACTTTTATTATCTAGTACCATTTCACTAGATAATGGATTGGTGTATGTTCATAGAGTACAAGTAACTCCATCCAAAATATATTTTTGTGGTCCTGAAGTTAATCTTTCTAATCGAGTTTTGCGCAACTATCCTGAAGACACTGATAACTTCCTTCGCGTTTCTTTCGTTGATGAGAATATGGATAAACTCCGTTCGTCTGATTTGTTGTCGTGTTCCAATGGTATAGAGGTGGACAAAGAAACAAGTGTTCATCAGAGAGTACTGTCTACGCTAAAAAACGGCCTAGAAATTGGTGACAAGAAGTTCGAGTTTCTTGCTTTCTCGTCAAGTCAACTACGCGATAACTCTGCGTGGATGTTTGCATCGAGAAAAGGACTAACTGCGTGTGATATAAGAAAATGGATGGGAGATTTTCATGAAATTAAGAATGTGGCGAAATATGCAGCAAGGCTAGGTCAATCATTCAGCTCTTCAAGAGAAACGGTGAGTGTTGGAAGACACGAAATCGAAATCATTCCTGATATAGAATTGACAAGAGGTGAAATCAAATATTGTTTTTCGGATGGAATAGGGAAGATATCTTATGAATTGGCACAAGAAGTTGCTAGACAATGCGGCTGCGACGATCATATTATTCCATCTGCATTTCAAATCAGATATGGTGGATACAAAGGTGTTGTTGCTATTGATCCTAACTCATCAGCTAAACTTTCCTTGAGAAAAAGCATGTGCAAGTTTAAGTCAGAAAACACAAAACTTGATGTCTTGTCATGGAGTAAACACAAACCGTGCTTTCTTAACCGACAAGTAATCGTTCTCTTGTCAACCCTCGGTGTCAAGGATCGAGTCTTTAAAAGGATGCAAAGGGAGATTGTTAATAAACTCAAAATGATATCAAGAAAGCCATTCAATGCACTAGACATGATGTCACAAGGAGAGATTACAACCATGTTAAGGGAAATGCTTATTTGTGGCTTCCATCCAGAAAATGAACCTTTTCTTTCCATGATTTTGAGAACAATATATGCATCAAAGTTACAAGAATTGCAGCTCAAAACTAGGATATTTGTTAGAAAAGGAAGATCAATGTTAGGATGTTTGGATGAAACAAGGAGACTAAAATATGGAGAGGTCTTTGTGCAAATATCTCTTCCAAGAAATAAGCAATCAAATGTTACTTCTAAGAGCATTGGAGCAAAAAATGGTAAATATATTGTTAAGGGAAAGGTAGTTGTAGCAAAGAATCCATGTCTTCATCCCGGAGATGTAAGGATTTTGAGGGCGATCGATGTACCTTCCTTACATCATATGGTAGATTGTGTTGTTTTTCCACAGAAGGGGAGAAGACCACATCCTAATGAGTGTTCAGGAAGTGACTTGGATGGAGATGTCTACTTTGTCTGTTGGGACCCTGCTCTTATTCCTCCTCATCAGGAAAATCCAATGGATCATGCACCATCCAAACTCATGAGTATGGATCATGATGTCACATTACAGGATATAGAGGAACATTTCACACACTACATTGTCAAAGACACTTTAGGAATCATTGCAAGTGCACACACTGTGTTTGCTGATAAAGAATCTGAAAAGGCGATGAGTCATTCGTGCATAGAGCTTGCAAAACTACACTCGGTCGCAGTTGATTTTGCGAAATCCGGTGTCCCAGCCGAAATACCACAACATCTACAAGTACAACAATATCCAGATTTCATGGAAAGGCAAAACAAACCAACTTATCAATCAAACAGCATAATCGGAAAGCTTTACCGCGAAGTAAAGAACATCGCGCAACAAAAAAGCCACAGGAAATCCTTCACTAAAAAAGCAGCAATGAAGCTATATGATCATGACACAAAAATTGATGGTTTTGAAAAGTACTTAAAGATCGCTTGTGAGTACAAACACATGTATGATTCCAAGCTATTGAACTTAATGGATTACTATGGTATAGAAACAGAAGCAGAAATAATTAGTGGAAATATTGTTGACCCCACAGGAGGCGCAAATCTTTCAAATGACCAGAAAAATAAAAAGGAAAAACCATCTGTATTCCATAAAAAGAACAGAATTGGTTCAATGAATGAAAAGTAA 3117 0.3689 MCKTIQLDGFPSNLSAKEVMKFLEQHTGFQTVLAVIIEKHNDSMTHVNVQFTDKKCVETILNLVIKQHLCFNDTVLNAEVTKSDILPKPRIFAYSMDGVGVHFGCQTSKEKLSVLWEHSNASVKFGSRLGKLYIFFSYLSKDYKLQINSESISRIELHHSHCHTKNLLLFQLRSAPGIYEKFVSEMKYFKEDHDNHWTRSVDFTSSCCIGQSSALCFELLQNVEVPNFRPFYRNYYKFDNTFDLEKQHGFSSNLNFVPMVIPPEGFNLPYKILFKINSLVQHGCLPLQVIDADFFRMVDPERMKFEYIESALNKLHVMKECCYEPVQWLEEQYRRYSKNSSLLLSSTISLDNGLVYVHRVQVTPSKIYFCGPEVNLSNRVLRNYPEDTDNFLRVSFVDENMDKLRSSDLLSCSNGIEVDKETSVHQRVLSTLKNGLEIGDKKFEFLAFSSSQLRDNSAWMFASRKGLTACDIRKWMGDFHEIKNVAKYAARLGQSFSSSRETVSVGRHEIEIIPDIELTRGEIKYCFSDGIGKISYELAQEVARQCGCDDHIIPSAFQIRYGGYKGVVAIDPNSSAKLSLRKSMCKFKSENTKLDVLSWSKHKPCFLNRQVIVLLSTLGVKDRVFKRMQREIVNKLKMISRKPFNALDMMSQGEITTMLREMLICGFHPENEPFLSMILRTIYASKLQELQLKTRIFVRKGRSMLGCLDETRRLKYGEVFVQISLPRNKQSNVTSKSIGAKNGKYIVKGKVVVAKNPCLHPGDVRILRAIDVPSLHHMVDCVVFPQKGRRPHPNECSGSDLDGDVYFVCWDPALIPPHQENPMDHAPSKLMSMDHDVTLQDIEEHFTHYIVKDTLGIIASAHTVFADKESEKAMSHSCIELAKLHSVAVDFAKSGVPAEIPQHLQVQQYPDFMERQNKPTYQSNSIIGKLYREVKNIAQQKSHRKSFTKKAAMKLYDHDTKIDGFEKYLKIACEYKHMYDSKLLNLMDYYGIETEAEIISGNIVDPTGGANLSNDQKNKKEKPSVFHKKNRIGSMNEK* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1197 1038 MobiDBLite consensus disorder prediction 1011 1038 - -
Psa6g1197 1038 Pfam RNA dependent RNA polymerase 362 934 IPR007855 GO:0003968
Psa6g1197 1038 PANTHER RNA-DEPENDENT RNA POLYMERASE 2 1016 IPR007855 GO:0003968
Psa6g1197 1038 MobiDBLite consensus disorder prediction 1015 1038 - -
Psa6g1197 1038 PANTHER RNA-DEPENDENT RNA POLYMERASE 2 1016 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1197 Psa-Chr6 47754856 47758510 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1197 6 47754856 47758510 Psa6g1197 6 47754856 47758510 ECH