Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1194 ATGGGGAAAAGTAAGACAATTGAGTTGTTTGGATTCCCTACTCATGTGAATGTGTCTGATGTGAAGACATTTGTAGAGAAGTATACCGATGAAGGAAGTGTGTTTGCTATGAAGGTTAGAGTAGGCAAAGGCCGGACTCCCAGAGCGTATGCAATTATTCAATTCACTACTGCTAGACATGCTGCATATATGATGGCGTTACCTAGCAGAAATTCGTCGGCATTGGTGTACGGGAGCTCCTACTTAAAAGTCCGGGAAATGGAAAGAGATATTTGTCCGAAGCCAAGGCCAATTGAAGACAGTATGGATGATGTGAAACTGTATTTTGGCTGTCAGATCTCAAAGGAAAGATTCTCTGTTTTATGGAGAAAGGTGGATGTTTCTGTAGTTTTTGGGAATAAAATGAGAAAGTGGCGATTCTCTATGTGCCATGGTGATAAGAAGTTCAAACTTGAACTTTCGTATGAGAATATTTGGAAGATTGAGCTATGTCAACCACGGGGTAAAACTGTAAAGTATCTCCTGATACAGTTAATTGGTGCTCCCCGGGTTTTTGAGCTTTATGTTCCTACTTCAACAAGTGTATATGATGATCCTTTGAAGAACTATTCTATGGAATTCCCTGATGACCAATGGATCCGTAAAATAGATTTCACTCCTTGCAGTTGTATTGGGCAGTCTTCTGTTTTATGTCTAGAGCTTCCTAGTAACAGAGATTTACCGAATTTCAAGGAAAACTTTGCACATTATGAGGAAAGTGAGGGTCAATACACATTGGAGAGTGGATTTCCTTTTTCTTGCAATCCAGATATTGTCCCCATGGTTGCTCCTCCTCGAGGAATTCAAATTCCATTTGACATCTTGTTCAAAGTTAACTCATTGGTTCAGCACGGGTGTCTTTCAGGTTCTGAACTCAATAATGATTTCTATCGTCTAGTGGATCCACTTAAAATAAATGTTGAGTATATTGAGCATGCTTTAGAAAGGATGTACTTTTCAAAGGATTTCTGCTATGAACCTGCGAGATGGCTGAAAGATCAGTACAAAATATATCTTAGTGCAAATAACCCGCCTCGGTCACCATCTATATCGTTGGATAACGGGTTGGTATATGTTCGCAGGGTTCAGATAACACCATGCAAAGTATACTTTTCTGGCCCGGAGATTAATGTCTCGAATCGTGTTCTCCGTCATTTCCATGAACATATTGATAACTTTCTGCGTGTTTCATTTGTAGATGAGGAGCTGGATAAACTGTATTCAGCAGACTTATCTACACGTATTTCTGAGATTGGGAAAACTGAGATATACTACAGGATTCTTTCCATCCTTAGAAATGGCATAGATATTGGTGGTAGGAAGTTTGAATTTCTTGCTTTCTCATCAAGTCAGTTGCGTGAAAACTCGCTATGGATGTTTGCTCGTACAACAACTGGACTTACCGCTGATTCCATAAGGGAATGGATGGGAGATTTTAGCCGGATAAAAAATGTGGCTAAGTATGCTGCTAGACTCGGACAATCTTTTGGTTCGTCTACTGAAACTCTAAGCGTCAGCAGATACGAAATTGAATTTATTGAAGATCTGACGGTTGAAAATACTGAATATGTCTTCTCTGATGGAATTGGGAAAATATCTCGTGAGTTTGCCAGGAGAGTGGCTAAAAAATGTGGTTATGATTCTATGCCATCCGCCTTTCAGATTCGGTACGGCGGGTACAAAGGAGTTGTGGCAGTTGATCCAACCTCACATTGGAAGTTGTCACTGAGGGAGAGCATGCACAAGTATGATTCAGATAATGAAAAACTTGATGTTTTAGCATGTAGTAAGTTTCAGCCTTGCTATCTGAATCGACAATTGATTGCTCTCTTATCGACTCTCAATGTCAAGGACAGTGTTTTCGAGAAAAGACAGAAAGAAGCTGTTGATCAACTGAATACTATACTAACAGATTCAACAAAGGCACACGAAGTTTTGGACTTGATGTCTTCCGGGGAGGTCACTAATATGCTGAAGGAGATGCTTATTTGTGGCTACAAGCCTAATGTTGAACCATTTCTATCAATGATGCTGCAGACATTTAGGGCATCAAAGTTATTGGAATTGCGACAAAAAACTAGGATATTTATTCCAAAGGGAAGAGCAATGATGGGTGTTCTGGATGAAACTAAAACCCTTGAATATGGTCAAGTTTTTGTTCAATATTCTGACAGGTCCAGCAGTCTTTCTCATGTAGTTAAAGGCAAGGTCGTAGTAGCGAAAAACCCCTGCTTGCACCCGGGTGATGTTCGTGTTTTGAAGGCTGTTGATGTCCCAGATTTGCGCCACATGGTGGATTGTGTTGTTTTCCCTCAAAAAGGTCACAGGCCACATCCAAATGAATGTTCGGGAAGTGATCTAGACGGTGACATCTACTTTGTTTGTTGGGATTCTGAATTGATTCCACCTCAAATGACTGAACCAATGGAGTATGATTCTGCCCAACCTAAAGTATTGGATCACGATGTGGAGATTGAGGAAGTGGAAGAGTATTTTGCAAATTACTTGGTCAATGACAGTCTTGGAATAATTGCCAACGCCCACACTGTCCATGCAGATAGAGAGCCCGAAAAAGCAATGTCTGATCCATGTATTAGACTTGCAAAACTGTTCTCAGTAGCAGTTGACTTTCCTAAAACTGGTATTCCAGCTGAAATACCCCGGGAGCTTTTCGCCAAAGAATATCCAGACTTTATGGAGAAGCATGACAAACCAACCTACAAATCAGATAATGTAATAGGGAAACTTTTTAGAGAAATTCAAGGAATTTCAACAAGAGATGGTTCTATTACATCCTTCACACTTGAACTGGCTAAAAAGTCGTATGATCCCGACATGGAATTTGACGGCTTTATGGATTATGTCGAGGATGCCTTCTATCACAAATCCAATTATGACTACAAGTTGGGAAATCTGATGGACTACTACGGTGTCAAAACTGAATCAGAAATCCTTAGTGGGAATATCATGAAAATGTCTAAGTCTTTCACCAAAAGAAGGGATGCGGATGCGATTACTATGGCTGTAAGGTCCCTAAGGAAAGAGGCAAGGAGTTGGTTCAACGACGAAGTAGATTCTGGAAGTGATGATGCATATGCCAAAGCTTCTGCTTGGTATTATGTTACTTACCATCATAGTTACCATGGTTTGTACAATGAAGATATGAAGAGGGACCATTTTCTAAGCTTTCCATGGTGTGTTTACCATTTGCTTGTCCAAATCAAGAAGGGGAAAGCAAGAATGAGGATGCATTCTAGCATGGAGCAAAGTTTCAGTCGTGGGTTGCGTCTTGATTAA 3336 0.4035 MGKSKTIELFGFPTHVNVSDVKTFVEKYTDEGSVFAMKVRVGKGRTPRAYAIIQFTTARHAAYMMALPSRNSSALVYGSSYLKVREMERDICPKPRPIEDSMDDVKLYFGCQISKERFSVLWRKVDVSVVFGNKMRKWRFSMCHGDKKFKLELSYENIWKIELCQPRGKTVKYLLIQLIGAPRVFELYVPTSTSVYDDPLKNYSMEFPDDQWIRKIDFTPCSCIGQSSVLCLELPSNRDLPNFKENFAHYEESEGQYTLESGFPFSCNPDIVPMVAPPRGIQIPFDILFKVNSLVQHGCLSGSELNNDFYRLVDPLKINVEYIEHALERMYFSKDFCYEPARWLKDQYKIYLSANNPPRSPSISLDNGLVYVRRVQITPCKVYFSGPEINVSNRVLRHFHEHIDNFLRVSFVDEELDKLYSADLSTRISEIGKTEIYYRILSILRNGIDIGGRKFEFLAFSSSQLRENSLWMFARTTTGLTADSIREWMGDFSRIKNVAKYAARLGQSFGSSTETLSVSRYEIEFIEDLTVENTEYVFSDGIGKISREFARRVAKKCGYDSMPSAFQIRYGGYKGVVAVDPTSHWKLSLRESMHKYDSDNEKLDVLACSKFQPCYLNRQLIALLSTLNVKDSVFEKRQKEAVDQLNTILTDSTKAHEVLDLMSSGEVTNMLKEMLICGYKPNVEPFLSMMLQTFRASKLLELRQKTRIFIPKGRAMMGVLDETKTLEYGQVFVQYSDRSSSLSHVVKGKVVVAKNPCLHPGDVRVLKAVDVPDLRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDSELIPPQMTEPMEYDSAQPKVLDHDVEIEEVEEYFANYLVNDSLGIIANAHTVHADREPEKAMSDPCIRLAKLFSVAVDFPKTGIPAEIPRELFAKEYPDFMEKHDKPTYKSDNVIGKLFREIQGISTRDGSITSFTLELAKKSYDPDMEFDGFMDYVEDAFYHKSNYDYKLGNLMDYYGVKTESEILSGNIMKMSKSFTKRRDADAITMAVRSLRKEARSWFNDEVDSGSDDAYAKASAWYYVTYHHSYHGLYNEDMKRDHFLSFPWCVYHLLVQIKKGKARMRMHSSMEQSFSRGLRLD* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1194 1111 Pfam RNA dependent RNA polymerase 377 933 IPR007855 GO:0003968
Psa6g1194 1111 CDD RRM_SF 7 66 - -
Psa6g1194 1111 PANTHER RNA-DEPENDENT RNA POLYMERASE 4 1105 IPR007855 GO:0003968
Psa6g1194 1111 PANTHER RNA-DEPENDENT RNA POLYMERASE 4 1105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1194 Psa-Chr6 47614575 47620313 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1194 6 47614575 47620313 Psa6g1194 6 47614575 47620313 ECH