Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1192 ATGGTTTCAAGATCTTATTCAAATCTAGTAGAGTTAGCTTCTGGTGAAGCTTCATCATTTGGTTTGATGAATAGAAGAATTCCAAGGATTATGACTGTTGCTGGATTGATATCTGAATCTGATGTTATTGTTGATGACGATCAAGTAGAGAGTGTTTCTTCAGATATCTCTTCGTCTTCGGTACACCGGGACCGGATCATAATAGTAGCGAATCAGCTTCCTATTAAGGCTCACAAGAATCAAGATGGTGATAGGAGTTTTTGGTCTTTTGATTGGGATGAAAATTCGCTTCTTCAATTGAAAGATGGAATGGGTGATGATGATATTGAGATTATTTATGTTGGATGCTTGAAAGAAGATGTTCATCCAAATGAACAAGATGAGGTTTCAATGATACTTCTTGAGAATTACAAATGTGTCCCTACTTTTCTTCCGCCGGAGATGTTTACTAAGTACTATCATGGTTTTTGCAAACAACAGTTATGGCCGTTGTTTCATTACATGTTGCCGTTATCGCCCGAGCTTGGTGGTAGGTTTAATCGATCTTTGTGGCAAGCTTATGTATCGGTTAATAAGATTTTCGCTGATAGGATTATGGAAGTTATTAACCCGGAAGATGATTATGTTTGGATACATGACTATCATCTTATGGTGTTACCGACTTTCTTGAGGAAGAGGTTTAATCGGGTGAAACTTGGATTTTTCCTTCATAGTCCATTTCCTTCATCCGAAATTTACAAAACATTGCCTATTAGGGAAGAGCTATTGAGAGCTTTACTTAATTCGGATTTGATTGGGTTTCATACGTTTGATTATGCGCGGCATTTTCTCTCGTGTTGTAGTCGGATGCTAGGTCTTACCTACGAATCCAAGCGGGGGTATATCGGTATTGAGTATTATGGTAGGACTGTTAGTATCAAGATTCTTCCGGTTGGTATACATATGGGTCAGATTCAATCGGTATTAAGGCTGCAAGAAACCGAGGATAAAGTTTGCGAGCTGATTCGACAGTTTTCGGATCAAGGAAGGACAATGTTGCTTGGTGTAGATGATATGGATATATTTAAGGGAATAACTTTGAAGCTTTTGGCAATGGAGCAGCTTCTCATTCAGCATCCGGAGTATCGAGGAAAAGTCGTGTTAGTTCAGATAGCGAATCCTGCTAGGGGACGAGGGAAAGATGTGCAAGAAATGCAAGACGAGACGAAGGCAACCGTGAAACGGATCAACGAAACGTTTAGGAAACCAGGGTACGATCCTGTTATTTTGATTGACGAGCCGATGAAGTTTTATGAGAGTGGGAAAGATGTGCAAGAAATGCAAGACGAGACGAAGGCAACCGTGAAACGGATCAACGAAACGTTTAGGAAACCAGGGTACGATCCTGTTATTTTGATTGACGAGCCGATGAAGTTTTATGAGAGAGTTGCTTATTATGTTGTTGCCGAGTGTTGTCTAGTCACTGCGGTAAGGGATGGAATGAATCTCATACCATACGAATATATAGTCGGTCGTCAAGGAAATGAAACTTTGGATAAAGTTTTGAAGATAGGTTCTTCCCCTAAGAAAAAGAGCATGTTAGTTGTGTCTGAGTTCATTGGTTGTTCGCCGTCTTTAAGCGGGGCAATCAGAGTGAACCCGTGGCACATCGATGCTGTGGCCGATGCAATGGATTCTGCGTTAGGAATGGCCGATTCGGAAAAACAGCTTCGACACGAAAAGCATTATAGATATGTTAGTACTCATGATGTCGGGTATTGGGCCCGTAGCTTCTTACAGGATTTGGAAAGGGCTTGTAGTGATCATGTACAACGAAGGTGGTGGGGAATCGGGTTTGGATTAAGTTTTAAAGTCGTAGCACTCGATCCAAACTTTAGGAAGCTCTCAATGGATCACATAGTTTCGGCTTACAAACGGACGGCAAATAGGGCGATCCTTCTCGACTACGACGGTACACTAATGCCTCAGGTCTCCATTGATAAGAGTCCAACAGATAAAACCATTGAAATTCTTAATAGCTTGTGTCGAGATAAGAACAACATGGTGTTTCTTGTTAGTGCGAGAAGCCGAAAGATACTCTCCGAATGGTTTTCTCCTTGTGAGAATATAGGAATCGCGGCCGAGCATGGTTACTTTCTCAGAATGAAGCGAGACGACGAATGGGAAACCTGTGTTCCTGCAACCGATTGTAGTTGGAAACAAATCGCAGAGCCTGTGATGAAACTTTATACTGAAACAACTGACGGATCCACCATTGAAGATAAAGAGACTGCACTTGTTTGGTGGTATGAGGATGCAGATCCTGATTTTGGATCATGCCAAGCAAAGGAACTTCTCGATCATCTCGAAAGCGTGCTGGCAAATGAACCGGTGACCGTGAAAAGTGGCCAGAATTATGTCGAGGTGAAACCACAGGGTGTGAGCAAGGGAATAGTGGCGAAACGTCTACTTTCATCGATGGAAGAAAAGGGAATGTCGCCTGATTTTGTTTTATGTATAGGAGACGACAGATCGGATGAAGACATGTTCGAGGTAATCACGAGTTCGATGAACGGTCCAATAGCACCGAAAGCAGAAGTGTTTGCTTGCACGGTTTGTCGGAAACCGAGTAAGGCTAAGTACTATCTTGATGATACTGCTGAAATAGTGAGATTGATTCAAGGTTTAGCTTGTGTTTCAGATCAAAAAGTTTTATGCTAA 2700 0.4181 MVSRSYSNLVELASGEASSFGLMNRRIPRIMTVAGLISESDVIVDDDQVESVSSDISSSSVHRDRIIIVANQLPIKAHKNQDGDRSFWSFDWDENSLLQLKDGMGDDDIEIIYVGCLKEDVHPNEQDEVSMILLENYKCVPTFLPPEMFTKYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHMGQIQSVLRLQETEDKVCELIRQFSDQGRTMLLGVDDMDIFKGITLKLLAMEQLLIQHPEYRGKVVLVQIANPARGRGKDVQEMQDETKATVKRINETFRKPGYDPVILIDEPMKFYESGKDVQEMQDETKATVKRINETFRKPGYDPVILIDEPMKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVGRQGNETLDKVLKIGSSPKKKSMLVVSEFIGCSPSLSGAIRVNPWHIDAVADAMDSALGMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERACSDHVQRRWWGIGFGLSFKVVALDPNFRKLSMDHIVSAYKRTANRAILLDYDGTLMPQVSIDKSPTDKTIEILNSLCRDKNNMVFLVSARSRKILSEWFSPCENIGIAAEHGYFLRMKRDDEWETCVPATDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWWYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNYVEVKPQGVSKGIVAKRLLSSMEEKGMSPDFVLCIGDDRSDEDMFEVITSSMNGPIAPKAEVFACTVCRKPSKAKYYLDDTAEIVRLIQGLACVSDQKVLC* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1192 899 Pfam Trehalose-phosphatase 646 879 IPR003337 GO:0003824|GO:0005992
Psa6g1192 899 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 432 - -
Psa6g1192 899 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 433 896 - -
Psa6g1192 899 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 64 428 - -
Psa6g1192 899 Gene3D Glycogen Phosphorylase B; 433 580 - -
Psa6g1192 899 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 431 599 - -
Psa6g1192 899 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 432 IPR001830 GO:0003824|GO:0005992
Psa6g1192 899 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 433 896 IPR001830 GO:0003824|GO:0005992
Psa6g1192 899 Gene3D Glycogen Phosphorylase B; 320 432 - -
Psa6g1192 899 Pfam Glycosyltransferase family 20 433 596 IPR001830 GO:0003824|GO:0005992
Psa6g1192 899 Pfam Glycosyltransferase family 20 65 431 IPR001830 GO:0003824|GO:0005992
Psa6g1192 899 SUPERFAMILY HAD-like 643 890 IPR036412 -
Psa6g1192 899 Gene3D - 642 758 IPR023214 -
Psa6g1192 899 Gene3D - 772 898 IPR023214 -
Psa6g1192 899 CDD HAD_TPP 644 884 - -
Psa6g1192 899 Gene3D Glycogen Phosphorylase B; 57 319 - -
Psa6g1192 899 CDD GT20_TPS 65 596 IPR001830 GO:0003824|GO:0005992
Psa6g1192 899 TIGRFAM T6PP: trehalose-phosphatase 642 889 IPR003337 GO:0003824|GO:0005992
Psa6g1192 899 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 645 846 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1192 Psa-Chr6 47531756 47534654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1192 1 895 Trehalose Biosynthesis Gene Families AT1G68020 75.468 0.0 1405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1192 6 47531756 47534654 Psa6g1192 6 47531756 47534654 ECH