Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1186 ATGTCGACATCAGTAGACTATACAGATCAAAGAGCCGAAGCGATTCCATGTTCCACAGCTACGCCAAATTGGACCGTTCATGTTTCAGATATAAGAACGGTTAAAGTGAGTAACATATCACAGATTACTTCCAAACAAGACATTGAAGAATTCTTTTCATTCTCAGGTGATATTCAATATATCGAGATTCAAAGGGAATCTGATCGCACTCAGGTTGCTTATGTTACCTTTAAGGATTCACAGGGAGCAGAGACAGCAGTTCTCTTGACAGGTTCTAAGATAGGTGACCTATATGTCACGATATCGCCGGTCGAGAAGTACCAGCTTCCCCCTGAAGCTCTTCCGTCAAGTCCTACAAACCGAAATAATGTTGCTGTTAAGAAGGCTGAAGATGCGATAAGTACCATGCTTGCAAAGGGTTTCATTTTAGGAAAGGATGCAATCAACAAGACAAAATCCTTGGATGAGCGTCTTCAATTGACCTCTAATGCTTCTTCAACAGTTGCTTCCATTGATCGTAAAATTGGTTTAAGCGATAAACTAAGTATTGGCACAACCATTGTGAATGAAAAGGTGAAAGAGATGGATGAAAGGTATCAGCTTTCTGGAATGACAAAGTCTGCTTATGCTGTTGCTGAGCAAAAGGCAAGTAGTGCTGGAACAGCTATCATGAGCAATTCTTATGTCTTAACCGGAGCGTCATGGGTGTCGAGTGCGTTTAGTGCTATTGCAAAGGCAGCTGAGGATGTCAGCACGATGACCAAGGAGAAGGTTGAACAAGCTGCGGTGGAAAAAAATGAGATTATTTACAGTGAAAGAAAAGGGACGGTTGATGAGTTTTCTCAGATGCACTTTGAACAGTCGTTAAACAGCGGCCCTGCAGTCGTTCCTGTTAATTCAATGAATGACAGTAAAGCTGGTAATTTTCTAACATGA 936 0.4156 MSTSVDYTDQRAEAIPCSTATPNWTVHVSDIRTVKVSNISQITSKQDIEEFFSFSGDIQYIEIQRESDRTQVAYVTFKDSQGAETAVLLTGSKIGDLYVTISPVEKYQLPPEALPSSPTNRNNVAVKKAEDAISTMLAKGFILGKDAINKTKSLDERLQLTSNASSTVASIDRKIGLSDKLSIGTTIVNEKVKEMDERYQLSGMTKSAYAVAEQKASSAGTAIMSNSYVLTGASWVSSAFSAIAKAAEDVSTMTKEKVEQAAVEKNEIIYSERKGTVDEFSQMHFEQSLNSGPAVVPVNSMNDSKAGNFLT* 312
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1186 311 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 11 306 - -
Psa6g1186 311 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 96 IPR000504 GO:0003723
Psa6g1186 311 SUPERFAMILY RNA-binding domain, RBD 24 108 IPR035979 GO:0003676
Psa6g1186 311 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 11 306 - -
Psa6g1186 311 SMART rrm1_1 33 102 IPR000504 GO:0003723
Psa6g1186 311 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Psa6g1186 311 Gene3D - 28 102 IPR012677 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Psa6g1186 Psa-Chr6 47093465 47095906 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1186 6 47093465 47095906 Psa6g1186 6 47093465 47095906 ECH