Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1171 ATGAGTACTGCCATTGGAGTTTCAGGTTTGGCTCATTTGTTTGGCATCGTCTCCATCATACTCTTGCTTGTTTGGTTGTTGCACTATCGCGAAGGGATCGACTATGATTCCGACGACGGACTTTGCGTCTTCAATGTGCATCCTTTGATGATGTTCTTGGGATTTATTTTCCTTGTTGGTGAAGGTGTAATGGCGTTCCAAACTGTACCGAACCAAAGACCTATACCAAAGTTTGTTCATATGACATTGCACTTGATAGCTATTGTTCTTGGCATAGTTGGTCTGTGTGCCGTTTTCAAGTTCCATAGTATGCGGAACATTGCCGACGTTTATAGCCTTCATTCATGGATTGGAATTGGAACGTTCTGCTTGTTTGGTTTGCAGTGGCTATTTGGTTTTGTAACTTTCTTGGTTCCTGGAGCACAAGGTCCAACAAGAGCAAGAGTGCTTCCATGGCATAGAGCTGGTGGTAGAGTGCTACTTTTTATGGCAATATGTGCTGCAGAAACAGGATTGATGGAGAAGTCTGGTTTCTTAAATCTAAAACCATATCAGAGAGAAACTAATTTGGTCAACTTTCTAGGTCTTACAATTCTCTTGTTTGGTGTATTTGTAAACATGTCTGTTGGTATTCGTTAA 639 0.4131 MSTAIGVSGLAHLFGIVSIILLLVWLLHYREGIDYDSDDGLCVFNVHPLMMFLGFIFLVGEGVMAFQTVPNQRPIPKFVHMTLHLIAIVLGIVGLCAVFKFHSMRNIADVYSLHSWIGIGTFCLFGLQWLFGFVTFLVPGAQGPTRARVLPWHRAGGRVLLFMAICAAETGLMEKSGFLNLKPYQRETNLVNFLGLTILLFGVFVNMSVGIR* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1171 212 ProSiteProfiles Cytochrome b561 domain profile. 10 210 IPR006593 -
Psa6g1171 212 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 3 211 - -
Psa6g1171 212 SMART 561_7 46 172 IPR006593 -
Psa6g1171 212 Gene3D - 2 210 - -
Psa6g1171 212 PANTHER CYTOCHROME B561-RELATED 3 211 IPR043205 GO:0016491
Psa6g1171 212 CDD Cyt_b561_ACYB-1_like 37 180 - -
Psa6g1171 212 Pfam Eukaryotic cytochrome b561 46 178 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1171 Psa-Chr6 46117965 46119205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1171 10 211 Chloroplast and Mitochondria Gene Families AT1G14730 54.455 1.49e-77 230
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1171 6 46117965 46119205 Psa6g1171 6 46117965 46119205 ECH